进化酵母菌株在基因淘汰后的进化酵母菌株的渐进性转录基因转移
Bei Jiang1,2, Chuyao Xiao1,3,4, Li Liu1
1MOE Key Laboratory of Gene Function and Regulation, State Key Laboratory of Biocontrol, Innovation Center for Evolutionary Synthetic Biology, School of Life Sciences, Sun Yat-sen University, Guangzhou 510275, China.
iScience
|November 19, 2024
概括
酵母菌株的基因淘汰破坏了细胞平衡. 适应性进化实验表明,细胞努力恢复原来的基因表达状态,而不是采用不同的亚最佳补偿状态.
科学领域:
- 分子生物学分子生物学
- 酵母遗传学 酵母遗传学
- 系统生物学 系统生物学
背景情况:
- 基因淘汰会扰乱细胞平衡,导致基因表达和表型的改变.
- 了解遗传干扰的长期转录组后果对于细胞生物学至关重要.
研究的目的:
- 为了研究酵母菌株在基因淘汰 (hap4Δ和ade1Δ) 后的适应性进化.
- 为了确定细胞是否可以在遗传干扰后恢复到它们在淘汰赛前的转录态状态.
主要方法:
- 在hap4Δ和ade1Δ酵母菌株上进行了适应性进化实验.
- 进行了转录组分析,以比较淘汰和进化菌株的基因表达特征与野生类型.
主要成果:
- 具有更高野生类型表达和更多交互伙伴的基因最初更有可能被恢复.
- 大多数最初恢复的基因随着进化的进展而变得无法恢复;超过60%的差异表达基因仍然无法恢复.
- 进化的菌株发展出不同的转录基因状态,与原始菌株分开,与核糖体生物生成组件的系统变化.
结论:
- 酵母淘汰菌株在恢复原始转录态状态时表现出显著的困难,即使在扩展培养后.
- 补偿机制驱使进化的菌株进入不同的,低于最佳的转录态状态,说明了复杂的扰乱后动态.
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