对四足动物双的进化起源进行比较的转录基因洞察
Dario Tommasini1, Takeshi Yoshimatsu2, Tom Baden3
1Helen Wills Neuroscience Institute, University of California Berkeley, Berkeley, CA, USA.
bioRxiv : the preprint server for biology
|November 22, 2024
概括
四足动物双从脊椎动物的祖先红色进化而来. 这种进化路径,从红色圆到其他光谱类型,表明圆光感受器的出现顺序是保留的.
科学领域:
- 进化生物学是进化的生物学.
- 分子生物学分子生物学
- 视觉科学 视觉科学 视觉科学
背景情况:
- 四足动物双体,包括主要和辅助成员,在各种脊椎动物中存在,但在鱼类和类哺乳动物中不存在.
- 了解双的进化轨迹可以阐明脊椎动物的光受体进化.
研究的目的:
- 为了研究四足动物双的进化起源.
- 识别分离双子成员的分子特征及其与其他光受体的进化关系.
主要方法:
- 对六种脊椎动物物种的光受体进行了单细胞和单核转录组分析.
- 计算方法被用来分离和分析子子类型,并确定分子区别.
主要成果:
- 主要和辅助双子成员在和中被计算分离,揭示了不同的分子特征.
- 比较的转录学表明,双子成员都源于祖先的红色.
- 基因表达模式表明,子亚型 (红色 → 绿色 → 蓝色 → 紫外线) 的进化顺序是保留的,并且子在子光谱多样化之前存在.
结论:
- 四足动物双从祖先的红色进化,具有保留的基因表达顺序,影响子类型的出现.
- 杆子可能是在的光谱多样化之前演化出来的,这表明光受体进化中的早期分歧.
相关概念视频
Convergent Evolution
29.2K
Evolution shapes the features of organisms over time, ensuring that they are suited for the environments in which they live. Sometimes, selection pressure leads to the rise of similar but unrelated adaptations in organisms with no recent common ancestors, a process known as convergent evolution.
29.2K
Gene Duplication and Divergence
6.4K
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
6.4K
Multi-species Conserved Sequences
4.3K
Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...
4.3K
Cis-regulatory Sequences
10.2K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
10.2K
Lampbrush Chromosomes
8.1K
In 1882, Flemming observed lampbrush chromosomes (LBC) in salamander eggs. Later in 1892, Rückert observed LBCs in shark egg cells and coined the term "lampbrush chromosomes" because they looked like brushes used to clean kerosene lamps.
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
LBCs are made up of two pairs of conjugating homologous chromatids. Each chromatid consists of alternatively positioned regions of condensed-inactive chromatin and loosely placed-active side loops, which can be contracted and extended. The loops...
8.1K


