阿克拉西斯·科纳的基因组和发育转录组揭示了真核生物多细胞通路的深层起源
Sanea Sheikh1,2, Cheng-Jie Fu1,3, Matthew W Brown4,5
1Program in Systematic Biology, Department of Organismal Biology, Uppsala University, Uppsala, Sweden.
Nature communications
|November 25, 2024
概括
虫,早期的真核生物,在没有饥饿的情况下发展多细胞性. 阿克拉西斯科纳基因组揭示了新型基因,并表明基本的多细胞发育工具在真核生物历史的早期发展.
科学领域:
- 简介:真核生物的进化过程.
- 细胞生物学 细胞生物学
- 发育生物学是发展生物学.
背景情况:
- 类动物表现出聚合多细胞性 (AGM),这是早期真核生物中罕见的特征.
- 虫代表了一种独特的模型,用于研究多细胞的进化.
研究的目的:
- 测序Acrasis kona基因组并分析其跨发育阶段的转录组.
- 为了研究在Acrasis kona.中AGM背后的分子机制.
- 为了比较Acrasis kona中的AGM发展与Dictyostelium discoideum和动物发展.
主要方法:
- 在Acrasis kona.的基因组测序.
- 在发育前,中期和后阶段进行转录组分析.
- 基因组和转录基因组分析的比较.
主要成果:
- 阿克拉西斯科纳基因组含有新型基因,并表现出显著的水平基因转移.
- 多基因家族很普遍,它们编码了近一半的蛋白质组.
- A. kona 的发育在代谢上是活跃的,没有明显的饥饿,自或蛋白质酶上调.
- 信号传递,运动和细胞外基质路径与Dictyostelium和动物发育有相似之处.
结论:
- 饥饿不是AGM发展的先决条件.
- 多细胞发育的基本工具包很可能起源于真核生物进化的早期.
- 阿克拉西斯科纳为理解多细胞的演变提供了一个独特的模型.
相关概念视频
General Transcription Factors
5.2K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.2K
Transcription
20.2K
Transcription is the synthesis of RNA from a DNA sequence by RNA polymerase. It is the first step in producing a protein from a gene sequence. Additionally, many other proteins and regulatory sequences are involved in correctly synthesizing messenger RNA (mRNA). Transcriptional regulation is responsible for the differentiation of different types of cells and often for the proper cellular response to environmental signals.
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
Transcription Can Produce Different Kinds of RNA Molecules
In eukaryotes,...
20.2K
Genome Annotation and Assembly
18.8K
The genome refers to all of the genetic material in an organism. It can range from a few million base pairs in microbial cells to several billion base pairs in many eukaryotic organisms. Genome assembly refers to the process of taking the DNA sequencing data and putting it all back together in a correct order to create a close representation of the original genome. This is followed by the identification of functional elements on the newly assembled genome, a process called genome annotation.
18.8K
Somatic to iPS Cell Reprogramming
2.2K
Reprogramming alters the gene expression in somatic cells, transforming them into induced pluripotent stem (iPS) cells over several generations. Scientists can reprogram cells by introducing genes for four transcription factors—Oct4, Sox2, Klf4, and c-Myc (OSKM) by viral or non-viral methods. These factors are also known as Yamanaka factors after Shinya Yamanaka, who first generated iPS cells using mouse skin cells. Yamanaka was awarded the Nobel Prize in Physiology or Medicine in 2012...
2.2K
Zygotic Development And Stem Cell Formation
5.1K
The development of all multicellular organisms starts with the fusion of haploid cells called sperm and egg to form a diploid zygote. A zygote is a totipotent cell that can develop into a complete organism. The zygote undergoes cell division or cleavage to form an 8-cell mass. Until this stage, the cells are spherical, loosely attached, and remain totipotent. Totipotent cells are capable of developing both the embryonic and the extraembryonic tissues. However, as they continue to divide, they...
5.1K
Genomic DNA in Eukaryotes
46.7K
Eukaryotes have large genomes compared to prokaryotes. To fit their genomes into a cell, eukaryotic DNA is packaged extraordinarily tightly inside the nucleus. To achieve this, DNA is tightly wound around proteins called histones, which are packaged into nucleosomes that are joined by linker DNA and coil into chromatin fibers. Additional fibrous proteins further compact the chromatin, which is recognizable as chromosomes during certain phases of cell division.
46.7K


