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相关概念视频

¹H NMR of Conformationally Flexible Molecules: Temporal Resolution00:52

¹H NMR of Conformationally Flexible Molecules: Temporal Resolution

807
At room temperature, the chair conformer of cyclohexane undergoes rapid ring flipping between two equivalent chair conformers at a rate of approximately 105 times per second. These two chair conformers are in equilibrium. The rapid ring flipping results in the interconversion of the axial proton to an equatorial proton and an equatorial to the axial proton. Such interconversions are too rapid and cannot be detected on the NMR timescale. Hence, the NMR spectrometer cannot distinguish between the...
807
Newman Projections02:06

Newman Projections

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Different notations are used to represent the three-dimensional structure of molecules on two-dimensional surfaces. One of the most commonly used representations is the dash-wedge formula. The dashed wedges, solid wedges, and the plane lines indicate the groups situated behind the plane, coming out of the plane, and in the plane, respectively.
The organic molecules rotate across the single bonds leading to numerous temporary three-dimensional structures of varying energy known as...
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Protein Organization01:13

Protein Organization

136.5K
Overview
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Protein Folding01:22

Protein Folding

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Overview
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RNA Structure01:19

RNA Structure

4.7K
The basic structure of RNA consists of a string of ribonucleotides attached by phosphodiester bonds. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA) involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three...
4.7K
¹H NMR of Conformationally Flexible Molecules: Variable-Temperature NMR01:15

¹H NMR of Conformationally Flexible Molecules: Variable-Temperature NMR

1.1K
The axial and equatorial protons in cyclohexane can be distinguished by performing a variable-temperature NMR experiment. In this process, except for one proton, the remaining eleven protons are replaced by deuterium. The deuterium substitution avoids the possible peak splitting caused by the spin-spin coupling between the adjacent protons. The remaining proton flips between the axial and equatorial positions.
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Investigating Protein Sequence-structure-dynamics Relationships with Bio3D-web
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通过BASH MaP揭示的RNA三级结构和构造动态.

Maxim Oleynikov1, Samie R Jaffrey1

  • 1Department of Pharmacology, Weill Medical College, Cornell University, New York, United States.

eLife
|December 3, 2024
PubMed
概括

我们开发了BASH MaP,一种新的RNA三级结构分析方法,以发现替代RNA构造. 这种方法揭示了以前隐藏的RNA结构和动态,进步了我们对RNA功能的理解.

科学领域:

  • 分子生物学分子生物学
  • 结构生物学 结构生物学
  • 生物化学 生物化学

背景情况:

  • RNA的三级结构决定了各种生物功能.
  • 预测RNA三级构造和识别替代结构仍然是分子生物学中的重大挑战.

研究的目的:

  • 开发和验证一种用于识别替代RNA三级结构的新方法.
  • 研究RNA分子的结构多样性和动态,包括G-四重复合体和菜合体.

主要方法:

  • 开发BASH MaP (单分子二甲基硫酸盐足迹) 来探测瓜诺辛N7的可访问性.
  • 将BASH MaP与DAGGER计算管道集成,用于分析替代RNA结构.
  • 应用BASH MaP来研究RNA G-四重复合体在体外和细胞内,以及菜合体.

主要成果:

  • 在BASH MaP中,成功地确定了RNA G-四重复合体的多种构造状态和动态.
  • 对菜体的分析揭示了与其光状态相关的替代三级构造.
  • 该研究表明,BASH MaP能够检测以前无法检测的RNA三级结构.

结论:

  • BASH MaP为RNA结构分析提供了一种强大的新方法.
关键词:
一个AKT2就是AKT2.在DMS探测中进行探测.在G-quadruplex中使用.化学探测 化学探测 化学探测人类 人类 人类 人类 人类 人类 人类分子生物物理学分子生物物理学聚UG是什么意思多UG是什么意思菜,西班牙菜.结构生物学结构生物学

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  • 该方法揭示了替代RNA的三级结构及其功能含义.
  • 这项工作增强了对RNA结构异质性和动态的理解.