使用Glittr.org查找,比较和重复使用在线培训和教育材料
Geert van Geest1,2, Yann Haefliger1, Monique Zahn-Zabal1
1Swiss Institute of Bioinformatics, Quartier Sorge-Bâtiment Amphipôle, Lausanne, Switzerland.
PloS one
|December 5, 2024
概括
Glittr.org是一个精心策划的数据库,帮助研究人员在Git平台上找到计算生命科学教育材料. 分析揭示了对材料可用性,协作和许可的洞察力,改善了生命科学界的FAIR数据原则.
科学领域:
- 计算生命科学 生命科学
- 生物信息学教育教育
- 数字奖学金数字奖学金
背景情况:
- 计算生命科学的教育材料分散在网上,使得它们很难找到.
- 许多有价值的资源都在 Git 存储库中托管,这些存储库位于 GitHub 和 GitLab 等平台上.
- 这些分散的资源的可发现性是学习者和教育工作者面临的重大挑战.
研究的目的:
- 介绍Glittr.org,一个手动策划的 Git 存储库数据库,用于计算生命科学教育材料.
- 使用户能够根据各种标准搜索和比较教育材料,包括参与度量.
- 分析数据库,了解材料的可用性,协作模式和许可.
主要方法:
- 手动策划包含教育材料的 Git 存储库.
- 开发一个可搜索的数据库 (Glittr.org) 与分类和参与度量.
- 对数据库条目进行分析,以评估主题分布,作者协作和许可.
主要成果:
- Glittr.org包含664个条目,涵盖6个计算生命科学类别.
- 分析揭示了对每个主题材料的可用性,开发者协作模式和许可实践的见解.
- 该数据库突出显示了缺乏开放式教育材料的领域以及Git在协作中的作用.
结论:
- Glittr.org提高了计算生命科学教育资源的可查性和可访问性.
- 该平台促进遵守FAIR (可查找,可访问,可互操作,可重复使用) 原则.
- 提高可发现性和共享性有利于学习者,教育工作者和更广泛的生命科学社区.
相关概念视频
Glaucoma: Overview
507
Glaucoma is an eye condition characterized by increased intraocular pressure that damages the retina and optic nerve, leading to irreversible blindness if left untreated. The human eye has various components, including the cornea, iris, pupil, lens, and optic nerve. Aqueous humor is secreted by the epithelium of the ciliary body in the posterior chamber and flows through the trabecular meshwork and canal of Schlemm, maintaining normal intraocular pressure. The trabecular meshwork and the canal...
507
Improving Translational Accuracy
2.5K
2.5K
Super-resolution Fluorescence Microscopy
6.9K
Super-resolution fluorescence microscopy (SRFM) provides a better resolution than conventional fluorescence microscopy by reducing the point spread function (PSF). PSF is the light intensity distribution from a point that causes it to appear blurred. Due to PSF, each fluorescing point appears bigger than its actual size, and it is the PSF interference of nearby fluorophores that causes the blurred image. Various approaches to achieving higher resolution through SRFM have recently been...
6.9K
Open Angle Glaucoma: Treatment
391
In open-angle glaucoma, the iridocorneal angle remains open, but the trabecular meshwork becomes stiff, slowing down the outflow of aqueous humor. This causes a buildup of aqueous humor in the anterior chamber, leading to a sudden increase in intraocular pressure. The treatment for open-angle glaucoma focuses on reducing the elevated intraocular pressure by either decreasing the secretion of aqueous humor or increasing its outflow.
Drugs such as carbonic anhydrase inhibitors, α2- and...
Drugs such as carbonic anhydrase inhibitors, α2- and...
391
Glycolysis: Preparatory Phase
13.2K
In cellular metabolism (the complete breakdown of glucose to extract energy), glycolysis is the first step. Glycolysis takes place in the cytoplasm of both prokaryotic and eukaryotic cells. Glucose enters heterotrophic cells in two ways. One method is through secondary active transport, where the transport takes place against the glucose concentration gradient. The other mechanism uses a group of integral proteins called GLUT proteins, also known as glucose transporter proteins. These...
13.2K
Overview of Microscopy Techniques
9.7K
The early pioneers of microscopy opened a window into the invisible world of microorganisms. In 1830, Joseph Jackson Lister created an essentially modern light microscope. The 20th century saw the development of microscopes that leveraged nonvisible light, such as fluorescence microscopy that uses an ultraviolet light source and electron microscopy that uses short-wavelength electron beams. These advances significantly improved magnification, image resolution, and contrast. By comparison, the...
9.7K


