在GTE4-EML染色体阅读器复合体同时识别了H3K4三甲基化和H3K4乙化在Arabidopsis
Feng Qian1, Qiang-Qiang Zhao1, Jin-Xing Zhou1
1National Institute of Biological Sciences, Beijing 102206, China.
The Plant cell
|December 18, 2024
概括
一项新的研究揭示了全球转录因子组E4 (GTE4) 蛋白质复合体如何识别 histone 乙化和 H3K4 三甲基化 (H3K4me3) 标记. 这种合作促进了Arabidopsis植物的基因转录.
科学领域:
- 植物分子生物学 植物分子生物学
- 表观遗传学 在表观遗传学中,表观遗传学是指表观遗传学.
- 基因调节 基因调节
背景情况:
- 已知活跃的转录标记是素乙化和H3K4me3.
- 它们在植物基因调节中的合作作用尚不清楚.
研究的目的:
- 为了研究素乙化和H3K4me3在调节Arabidopsis.me3中的基因转录中的合作.
- 确定涉及的分子机制和蛋白质复合体.
主要方法:
- 染色体免疫沉,随后进行深度测序 (ChIP-seq).
- 对突变表型的分析 (gte4和 eml1/2双突变).
- 蛋白质复合体的形成和域分析.
主要成果:
- 鉴定出一种 GTE4-EML 复合物,该复合物能结合乙化组合素和 H3K4me3.3.
- eml1 eml2双突变体表现出与gte4相似的表型,具有重叠的基因表达变化.
- GTE4和EML2的基因与基因素乙化和H3K4me3共同占用,显示出协同色素协会.
- GTE4的染色体协会需要其基因和EML相互作用域.
结论:
- 一个涉及GTE4和EML蛋白质的新型综合体能够识别素乙化和H3K4me3.3.
- 这种复合体在促进Arabidopsis的基因转录全基因组中起到协同作用.
- 这项研究阐明了植物基因调节的关键表观遗传机制.
相关概念视频
Euchromatin
6.8K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions take up more dye, appearing darker, while the less-compact areas take up less dye and appear lighter. Based on the compaction level, chromatins are classified into two primary forms – euchromatin and heterochromatin.
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
6.8K
Histone Modification
13.0K
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
13.0K
Spreading of Chromatin Modifications
8.2K
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
Writers
The writer...
8.2K
Chromatin Immunoprecipitation- ChIP
11.0K
Chromatin immunoprecipitation, or ChIP, is an antibody-based technique used to identify sites on DNA that bind to transcription factors of interest or histone proteins. It also helps determine the type of histone modifications such as acetylation, phosphorylation, or methylation.
Types of ChIP
ChIP can be divided into two types - X-ChIP and N-ChIP. X-ChIP involves in vivo cross-linking of histones and regulatory proteins to DNA, fragmenting the DNA by sonication, and isolating the protein-DNA...
Types of ChIP
ChIP can be divided into two types - X-ChIP and N-ChIP. X-ChIP involves in vivo cross-linking of histones and regulatory proteins to DNA, fragmenting the DNA by sonication, and isolating the protein-DNA...
11.0K
Heterochromatin
10.8K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
10.8K


