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相关概念视频

Protein Complex Assembly02:41

Protein Complex Assembly

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Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types.  Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
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Cotranslational Protein Translocation01:20

Cotranslational Protein Translocation

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Translocation of proteins across membranes is an ancient process that occurs even in bacteria and archaebacteria. In fact, the components of the translocation machinery are still conserved between prokaryotes and eukaryotes.
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...
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Protein Translocation Machinery on the ER Membrane01:28

Protein Translocation Machinery on the ER Membrane

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The translocon complex situated on the ER membrane is the main gateway for the protein secretory pathway. It facilitates the transport of nascent peptides into the ER lumen and their insertion into the ER membrane.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the...
4.4K
Improving Translational Accuracy02:07

Improving Translational Accuracy

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Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
8.8K
Post-translational Translocation of Proteins to the RER01:27

Post-translational Translocation of Proteins to the RER

5.6K
A sizable fraction of proteins destined for ER are first synthesized in the cell cytosol and then transported across the ER membrane–a process called post-translational translocation. Similar to cotranslationally translocated proteins, these proteins also use the Sec translocon complex to enter the ER lumen.
Targeting proteins to the ER
Hsp40 and Hsp70 chaperone molecules bind the translated proteins in the cytosol to prevent their folding. The chaperone binding helps to keep the signal...
5.6K
Initiation of Translation02:33

Initiation of Translation

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Initiating translation is complex because it involves multiple molecules. Initiator tRNA, ribosomal subunits, and eukaryotic initiation factors (eIFs) are all required to assemble on the initiation codon of mRNA. This process consists of several steps that are mediated by different eIFs.
First, the initiator tRNA must be selected from the pool of elongator tRNAs by eukaryotic initiation factor 2 (eIF2). The initiator tRNA (Met-tRNAi) has conserved sequence elements including modified bases at...
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相关实验视频

Updated: Jun 4, 2025

Global Identification of Co-Translational Interaction Networks by Selective Ribosome Profiling
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Global Identification of Co-Translational Interaction Networks by Selective Ribosome Profiling

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同翻译性蛋白质复合组合的结构决定因素

Saurav Mallik1, Johannes Venezian2, Arseniy Lobov1

  • 1Department of Chemical and Structural Biology, Weizmann Institute of Science, Rehovot 7600001, Israel.

Cell
|December 21, 2024
PubMed
概括
此摘要是机器生成的。

在合成过程中蛋白质聚集的同翻译性蛋白质组合是由复杂的结构驱动的. 这一过程涉及不稳定的子单元相互稳定,影响基因表达和蛋白质稳定.

关键词:
阿尔法折叠同翻译组合mRNA局部化蛋白质复合物蛋白质相互作用蛋白质结构蛋白质稳定性核糖体概况一个分子 FISH翻译法规

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Rapid In Vivo Fixation and Isolation of Translational Complexes from Eukaryotic Cells
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Rapid In Vivo Fixation and Isolation of Translational Complexes from Eukaryotic Cells

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相关实验视频

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Global Identification of Co-Translational Interaction Networks by Selective Ribosome Profiling
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Pulldown Assay Coupled with Co-Expression in Bacteria Cells as a Time-Efficient Tool for Testing Challenging Protein-Protein Interactions

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Rapid In Vivo Fixation and Isolation of Translational Complexes from Eukaryotic Cells
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Rapid In Vivo Fixation and Isolation of Translational Complexes from Eukaryotic Cells

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科学领域:

  • 分子生物学
  • 结构生物学
  • 遗传学

背景情况:

  • 蛋白质复合组合对于生物功能至关重要.
  • 在蛋白质合成过程中发生的同翻译组合在人类细胞中越来越多地被识别出来.
  • 参与共翻译组合的潜在机制和特定蛋白质伙伴在很大程度上是未知的.

研究的目的:

  • 阐明控制同翻译组合的生物基础.
  • 识别在翻译过程中经历组装的蛋白质对.
  • 开发一个协同翻译组合的预测框架.

主要方法:

  • 分析蛋白质复合物的结构特征.
  • 使用AlphaFold2预测来识别结构特征.
  • 实验验证使用核糖体概况,静态测量扰动和单分子RNA光在位杂交 (smFISH).

主要成果:

  • 同翻译组合是由蛋白质复合体的结构性质决定的.
  • 参与共同翻译组合的子单元在孤立状态下不稳定,并相互稳定.
  • 结构特征和AlphaFold2预测准确地识别了跨物种的蛋白质组范围内的协同翻译组合对.

结论:

  • 建立了蛋白质三维结构和翻译过程之间的基本联系.
  • 证明结构对基因表达,mRNA局部化和蛋白质稳定有重大影响.
  • 同翻译组合是细胞功能必不可少的结构驱动机制.