揭示了固有无序蛋白质中温度依赖的结构变化的起源
Rintaro Inoue1, Takashi Oda2, Hiroshi Nakagawa3
1Institute for Integrated Radiation and Nuclear Science, Kyoto University, Osaka, Japan.
Biophysical journal
|December 25, 2024
概括
内在无序的蛋白质 (IDP) 随着温度的变化而发生结构变化. 这项研究发现,特定的IDP中温度诱导的结构变化主要是由于聚二螺旋含量下降.
科学领域:
- 蛋白质的结构和动态.
- 生物物理学的生物物理.
- 结构生物学是结构生物学.
背景情况:
- 内在无序蛋白质 (IDP) 缺乏稳定的三级结构,对环境条件敏感.
- 了解内部流动物体的依赖温度的行为,对于它们的生物功能至关重要.
研究的目的:
- 调查分叉结构DNA中化酶相关内核酶的内在无序区域中结构和动态的温度依赖性.
- 为了阐明这些温度诱导的变化背后的分子机制.
主要方法:
- 综合性方法结合了小角度X射线散射 (SAXS),圆形二重化 (CD) 和核磁共振 (NMR) 谱学.
- 准弹性中子散射 (QENS) 用于研究动力学.
主要成果:
- 萨克斯和CD数据显示旋转半径和圆的恒定直至313-323K,然后下降.
- 核磁共振表明没有促进阿尔法螺旋形成.
- 结构变化归因于聚二烯 (PPII) 螺旋体含量减少.
- 在相同的温度范围内,QENS显示了激活能量的轻微变化.
结论:
- 在这个IDP中,温度引起的结构变化主要是由PPII螺旋含量下降所驱动的.
- 可能涉及PPII螺旋和水之间的动态合作,可能与玻璃过渡有关.
- 内部蛋白质动态对于在不同温度下调节IDP结构至关重要.
相关概念视频
Intrinsically Disordered Proteins
17.7K
Intrinsically disordered proteins are a group of proteins that do not fold into specific three-dimensional structures. Their structural flexibility allows them to complement ordered proteins to perform functions that are inaccessible to rigid structures. They are more common in eukaryotes than prokaryotes and may either be exclusively intrinsically disordered or hybrid proteins, consisting of a mix of ordered and disordered regions. The absence of a rigid structure in these proteins can be...
17.7K
Protein Folding
7.8K
Proteins are chains of amino acids linked together by peptide bonds. Upon synthesis, a protein folds into a three-dimensional conformation, critical to its biological function. Interactions between its constituent amino acids guide protein folding, and hence the protein structure is primarily dependent on its amino acid sequence.
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
Protein Structure Is Critical to Its Biological Function
Proteins perform a wide range of biological functions such as catalyzing chemical reactions, providing...
7.8K
Protein Denaturation
3.9K
The function of proteins depends on their native three-dimensional structure, which is dictated by the amino acid sequence of the specific protein. Folding of the polypeptide chain takes place under specific conditions that energetically favor the folded conformation. In contrast, protein denaturation occurs spontaneously under unfavorable conditions that disrupt the integrity of the folded conformation. Thus, the chemical and physical environment of a protein, such as significant changes in pH...
3.9K
Protein and Protein Structure
78.4K
Proteins are one of the most abundant organic molecules in living systems and have the most diverse range of functions of all macromolecules. Proteins may be structural, regulatory, contractile, or protective. They may serve in transport, storage, or membranes; or they may be toxins or enzymes. Their structures, like their functions, vary greatly. They are all, however, amino acid polymers arranged in a linear sequence.
A protein's shape is critical to its function. For example, an enzyme...
A protein's shape is critical to its function. For example, an enzyme...
78.4K
Molecular Chaperones and Protein Folding
17.7K
The native conformation of a protein is formed by interactions between the side chains of its constituent amino acids. When the amino acids cannot form these interactions, the protein cannot fold by itself and needs chaperones. Notably, chaperones do not relay any additional information required for the folding of polypeptides; the native conformation of a protein is determined solely by its amino acid sequence. Chaperones catalyze protein folding without being a part of the folded protein.
The...
The...
17.7K
Protein Organization
136.5K
Overview
136.5K


