结合代谢学和外体序列学,揭示了罕见的有害异合体变体对基因功能和人类特征的分级影响
Nora Scherer1,2, Daniel Fässler3, Oleg Borisov1
1Institute of Genetic Epidemiology, Faculty of Medicine and Medical Center, University of Freiburg, Freiburg, Germany.
Nature genetics
|January 2, 2025
概括
这项研究使用了罕见变异的基因分析来识别与人类新陈代谢和代谢物水平相关的新基因. 研究结果揭示了遗传变异如何影响特征和疾病,为代谢途径提供了洞察力.
科学领域:
- 人类遗传学 人类遗传学
- 代谢学 代谢学 代谢学
- 系统生物学 系统生物学
背景情况:
- 了解人类新陈代谢对于识别疾病机制至关重要.
- 遗传学研究提供了强大的工具来剖析代谢途径,并确定新的基因代谢物协会.
研究的目的:
- 通过罕见变异聚合测试发现新的基因代谢物协会.
- 研究遗传变异对代谢特征和人类疾病的功能影响.
主要方法:
- 采用了全外体测序数据和罕见变异聚合测试.
- 计算 (在基因淘汰中) 和实验方法验证了遗传发现.
- 分析的重点是1,294种血和1,396种尿液代谢物.
主要成果:
- 鉴定了235个基因代谢物关联,其中许多以前没有报告过.
- 证明罕见的,有害的异合体变体提供了与代谢的先天性错误相当的洞察力.
- 硫酸盐载体 (SLC13A1,SLC26A1) 的功能变异对血硫酸盐,身高和肌肉骨状况产生了分级影响.
结论:
- 综合性遗传和计算方法可以在人类新陈代谢中发现新的参与者.
- 来自遗传研究的代谢读数对人类特征和疾病有信息.
- 这种方法提高了对复杂的代谢网络及其临床相关性的理解.
更多相关视频
09:37Navigating MARRVEL, a Web-Based Tool that Integrates Human Genomics and Model Organism Genetics Information
Published on: August 15, 2019
9.7K
11:35Screening for Functional Non-coding Genetic Variants Using Electrophoretic Mobility Shift Assay EMSA and DNA-affinity Precipitation Assay DAPA
Published on: August 21, 2016
12.9K
相关概念视频
Human Genetics
531
Human genetics provides a profound framework for understanding the interplay between genetic predispositions and human psychology. At the heart of this discipline lies the study of how genes influence physical traits, behaviors, and susceptibility to diseases. Each person carries a unique genetic code that subtly or significantly shapes their psychological and behavioral landscape.
The complex relationship between genetics and psychology is observable through common biological components such...
The complex relationship between genetics and psychology is observable through common biological components such...
531
Genome-wide Association Studies-GWAS
12.4K
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
12.4K
Incomplete Dominance
21.3K
Gregor Mendel's work (1822 - 1884) was primarily focused on pea plants. Through his initial experiments, he determined that every gene in a diploid cell has two variants called alleles inherited from each parent. He suggested that amongst these two alleles, one allele is dominant in character and the other recessive. The combination of alleles determines the phenotype of a gene in an organism.
21.3K
Pleiotropy
39.7K
Pleiotropy is the phenomenon in which a single gene impacts multiple, seemingly unrelated phenotypic traits. For example, defects in the SOX10 gene cause Waardenburg Syndrome Type 4, or WS4, which can cause defects in pigmentation, hearing impairments, and an absence of intestinal contractions necessary for elimination. This diversity of phenotypes results from the expression pattern of SOX10 in early embryonic and fetal development. SOX10 is found in neural crest cells that form melanocytes,...
39.7K
Genomics
35.8K
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
35.8K
Exon Recombination
3.5K
The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes.
Exon shuffling follows “splice frame rules.” Each exon...
Exon shuffling follows “splice frame rules.” Each exon...
3.5K
