PRDM9驱动了鱼类鱼类重组热点的位置和快速演变
Marie Raynaud1, Paola Sanna2, Julien Joseph3
1ISEM, Univ Montpellier, CNRS, IRD, Montpellier, France.
PLoS biology
|January 6, 2025
概括
PRDM9基因驱动了鱼类的重组热点的快速演变,类似于哺乳动物. 这表明PRDM9是PRDM9.
科学领域:
- 遗传学 遗传学 是一个
- 进化生物学 进化生物学
- 分子生物学分子生物学
背景情况:
- 介质重组发生在真核生物中的特定热点.
- 在哺乳动物中,PRDM9驱动了从促销者那里的重组,导致了快速的热点进化.
- 在一些血统中PRDM9的祖先作用和损失引发了关于其保存功能的问题.
研究的目的:
- 研究沙门类动物中PRDM9的功能,以了解其在化过程中的保留作用.
- 分析重组景观和PRDM9对鱼类物种热点的影响.
主要方法:
- 绘制了介质DNA双链断裂 (DSB) 的地图,以确定Oncorhynchus mykiss.中的重组启动地点.
- 分析了PRDM9基因型依赖的热点局部化.
- 检查了PRDM9指域多态性.
- 生成了O. mykiss,Oncorhynchus kisutch和Salmo salar. 的种群规模重组地图.
主要成果:
- 在远离发起体的热点聚集的DSB,富含H3K4me3和H3K36me3,并依赖PRDM9基因型.
- 高PRDM9指域多态性表明积极选择.
- 由于PRDM9标动机侵蚀,重组热点的快速转换在鱼类中被观察到.
结论:
- 在脊椎动物中,PRDM9在调节重组热点方面的功能是保留的.
- 由PRDM9驱动的快速进化动态已经活跃了数百万年.
相关概念视频
Conservative Site-specific Recombination and Phase Variation
5.9K
Because the DNA segments are cut and reorganized in a direction-specific manner, site-specific recombination has emerged as an efficient genetic engineering technique. Flippase and Cyclization recombinases or Flp and Cre, respectively, are two members of the tyrosine recombinase family derived from bacteriophages, that are used to mediate site-specific DNA insertions, deletions, and targeted expression of proteins in mammalian cell lines.
The recognition sites for Cre recombinase called LoxP...
The recognition sites for Cre recombinase called LoxP...
5.9K
Exon Recombination
3.5K
The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes.
Exon shuffling follows “splice frame rules.” Each exon...
Exon shuffling follows “splice frame rules.” Each exon...
3.5K
Speciation Rates
20.7K
Overview
20.7K
Formation of Species
38.6K
Speciation describes the formation of one or more new species from one or sometimes multiple original species. The resulting species are discrete from the parent species, and barriers to reproduction will typically exist. There are two primary mechanisms, speciation with and without geographic isolation—allopatric and sympatric speciation, respectively.
38.6K
Gene Conversion
9.6K
Other than maintaining genome stability via DNA repair, homologous recombination plays an important role in diversifying the genome. In fact, the recombination of sequences forms the molecular basis of genomic evolution. Random and non-random permutations of genomic sequences create a library of new amalgamated sequences. These newly formed genomes can determine the fitness and survival of cells. In bacteria, homologous and non-homologous types of recombination lead to the evolution of new...
9.6K
Homologous Recombination
49.7K
The basic reaction of homologous recombination (HR) involves two chromatids that contain DNA sequences sharing a significant stretch of identity. One of these sequences uses a strand from another as a template to synthesize DNA in an enzyme-catalyzed reaction. The final product is a novel amalgamation of the two substrates. To ensure an accurate recombination of sequences, HR is restricted to the S and G2 phases of the cell cycle. At these stages, the DNA has been replicated already and the...
49.7K


