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相关概念视频

Riboswitches01:56

Riboswitches

8.0K
Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
8.0K
Types of RNA01:23

Types of RNA

63.2K
Overview
Three main types of RNA are involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). These RNAs perform diverse functions and can be broadly classified as protein-coding or non-coding RNA. Non-coding RNAs play important roles in the regulation of gene expression in response to developmental and environmental changes. Non-coding RNAs in prokaryotes can be manipulated to develop more effective antibacterial drugs for human or animal use.
RNA...
63.2K
Regulation of Expression at Multiple Steps01:23

Regulation of Expression at Multiple Steps

868
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
868
Ribosome Profiling02:24

Ribosome Profiling

3.5K
Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
3.5K
RNA Stability01:53

RNA Stability

33.2K
Intact DNA strands can be found in fossils, while scientists sometimes struggle to keep RNA intact under laboratory conditions. The structural variations between RNA and DNA underlie the differences in their stability and longevity. Because DNA is double-stranded, it is inherently more stable. The single-stranded structure of RNA is less stable but also more flexible and can form weak internal bonds. Additionally, most RNAs in the cell are relatively short, while DNA can be up to 250 million...
33.2K
Covalently Linked Protein Regulators02:04

Covalently Linked Protein Regulators

6.8K
Proteins can undergo many types of post-translational modifications, often in response to changes in their environment. These modifications play an important role in the function and stability of these proteins. Covalently linked molecules include functional groups, such as methyl, acetyl, and phosphate groups, and also small proteins, such as ubiquitin. There are around 200 different types of covalent regulators that have been identified.
These groups modify specific amino acids in a protein....
6.8K

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Pathogenic human mitochondrial tRNA variants impair RNA processing by compromising 5' leader removal.

bioRxiv : the preprint server for biology·2026
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pH-dependent allosteric remodeling of a bacterial riboswitch couples alkaline activation to metal sensing.

bioRxiv : the preprint server for biology·2026
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Nucleic Acid Sequence Determinants of Transcriptional Pausing by the Human Mitochondrial RNA Polymerase (POLRMT).

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Structurally distinct manganese-sensing riboswitch aptamers regulate different expression platform architectures.

Nucleic acids research·2025
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Nucleic acid sequence determinants of transcriptional pausing by human mitochondrial RNA polymerase (POLRMT).

bioRxiv : the preprint server for biology·2025
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Opportunities for Riboswitch Inhibition by Targeting Co-Transcriptional RNA Folding Events.

International journal of molecular sciences·2024

相关实验视频

Updated: Jun 3, 2025

Nanomanipulation of Single RNA Molecules by Optical Tweezers
06:59

Nanomanipulation of Single RNA Molecules by Optical Tweezers

Published on: August 20, 2014

14.8K

结构上是不同的感应的 рибо交换机 适量体调节多样化的表达平台架构.

Christine N Stephen, Danea E Palmer, Clarisa Bautista

    bioRxiv : the preprint server for biology
    |January 7, 2025
    PubMed
    概括

    核转换器可以控制细菌的含量. 这项研究揭示了这些 рибо开关在转录过程中如何折叠,并感知和pH值,为细菌金属离子调节提供了新的见解.

    科学领域:

    • 分子生物学分子生物学
    • 生物化学 生物化学
    • 微生物学 微生物学

    背景情况:

    • 基因转换器通过控制基因表达来调节细菌的恒常性.
    • 现有的孤立体的结构数据不能完全解释对表达平台的体诱导信号.

    研究的目的:

    • 研究大肠杆菌中两种不同的 рибо开关 (mntP和alx) 的动态折叠和感应机制.
    • 阐明转录时间和pH在 рибо开关功能中的作用.

    主要方法:

    • 同转录RNA化学探测以可视化动态RNA折叠中间体.
    • 在转录过程中对 рибо开关折叠的单核酸分辨率分析.
    • 研究pH取决于的反应.

    主要成果:

    • 离子采样由RNA发生在,而不是之后,阿胺合成和折叠.
    • 确定了alx和mntP рибо开关的折叠路径中的关键差异.
    • 描述了Riboswitch对探测的特定pH影响.

    结论:

    • 细菌的 рибо开关以共同转录的方式启动金属离子采样.

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    Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins
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    Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins

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    相关实验视频

    Last Updated: Jun 3, 2025

    Nanomanipulation of Single RNA Molecules by Optical Tweezers
    06:59

    Nanomanipulation of Single RNA Molecules by Optical Tweezers

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    MS2-Affinity Purification Coupled with RNA Sequencing in Gram-Positive Bacteria
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    MS2-Affinity Purification Coupled with RNA Sequencing in Gram-Positive Bacteria

    Published on: February 23, 2021

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    Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins
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    Exploring Sequence Space to Identify Binding Sites for Regulatory RNA-Binding Proteins

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  • 不同的折叠机制和pH灵敏度允许相关的 рибо开关通过不同的环境提示检测.
  • 这项工作提供了高分辨率的视图的riboswitch折叠和传感动态.