由SecYEG-SecA复合体的一个单元介导的蛋白质转位的AFM观察
Yui Kanaoka1, Takaharu Mori2, Wataru Nagaike1
1Department of Physics, Graduate School of Science, Nagoya University, Nagoya, Aichi, Japan.
Nature communications
|January 8, 2025
概括
这项研究使用高速原子力显微镜 (HS-AFM) 可视化了蛋白质在膜上的转位. 研究人员在这个重要的细胞过程中观察到Seca蛋白的动态结构变化.
科学领域:
- 分子生物学分子生物学
- 生物物理学的生物物理.
- 细胞生物学 细胞生物学
背景情况:
- 蛋白质在细胞膜上的转移对于细胞功能至关重要.
- SecYEG复合体和Seca ATPase是参与这个过程的关键细菌蛋白质.
- 之前的研究缺乏蛋白质转位的视觉证据.
研究的目的:
- 为了在视觉上展示蛋白质跨膜转移的过程.
- 分析SeCA在转移期间的动态结构变化.
- 建立一种用于研究膜蛋白动态的新方法.
主要方法:
- 使用高速原子力显微镜 (HS-AFM) 可视化蛋白质转位.
- 使用纳米盘系统嵌入SecYEG-SecA复合体.
- 从单向分布的纳米光盘分析了HS-AFM数据.
主要成果:
- 在实时中成功可视化了未折叠的基质蛋白的转位.
- 在Seca的多交联域 (宽开和闭状态) 中观察到核酸依赖的动态结构变化.
- 证明了纳米盘-AFM方法在研究膜蛋白纳米级事件中的实用性.
结论:
- 纳米盘AFM方法为蛋白质转位提供了前所未有的视觉洞察力.
- 了解Seca的动态构造变化对于阐明转移机制至关重要.
- 这种方法适用于研究其他膜蛋白纳米级动态.
相关概念视频
Protein Translocation Machinery on the ER Membrane
4.4K
The translocon complex situated on the ER membrane is the main gateway for the protein secretory pathway. It facilitates the transport of nascent peptides into the ER lumen and their insertion into the ER membrane.
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the...
Sec61 protein conducting channel
In eukaryotes, the translocon complex comprises a core heterotrimeric translocator channel called the Sec61 complex. This channel includes three transmembrane proteins, Sec61α, Sec61β, and Sec61γ, and is the largest subunit of the...
4.4K
Post-translational Translocation of Proteins to the RER
5.6K
A sizable fraction of proteins destined for ER are first synthesized in the cell cytosol and then transported across the ER membrane–a process called post-translational translocation. Similar to cotranslationally translocated proteins, these proteins also use the Sec translocon complex to enter the ER lumen.
Targeting proteins to the ER
Hsp40 and Hsp70 chaperone molecules bind the translated proteins in the cytosol to prevent their folding. The chaperone binding helps to keep the signal...
Targeting proteins to the ER
Hsp40 and Hsp70 chaperone molecules bind the translated proteins in the cytosol to prevent their folding. The chaperone binding helps to keep the signal...
5.6K
Cotranslational Protein Translocation
7.2K
Translocation of proteins across membranes is an ancient process that occurs even in bacteria and archaebacteria. In fact, the components of the translocation machinery are still conserved between prokaryotes and eukaryotes.
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...
Sec61 channel partners for cotranslational translocation
During cotranslational translocation, the Sec61 channel partners with the signal recognition particle (SRP), the signal recognition particle receptor (SR), and the ribosomes to transport the nascent polypeptide chain...
7.2K
Insertion of Single-pass Transmembrane Proteins in the RER
6.6K
Integral membrane proteins are proteins adhered to the lipid bilayer of a cell organelle or membrane. They can be of two types: transmembrane integral proteins that span the lipid bilayer and monotopic proteins that are attached to either side of the membrane but do not pass through it.
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
Integral transmembrane proteins possess transmembrane and extra membrane domains. The transmembrane domains are primarily made of 20-25 hydrophobic amino acids arranged in a helical secondary confirmation. These...
6.6K
Tail-anchoring of Proteins in the ER Membrane
3.1K
Tail-anchored, or TA, proteins are estimated to make up to 3-5% of membrane proteins found in the eukaryotic cell. Such proteins have a single transmembrane domain located approximately 30 amino acid residues upstream from the C-terminal end. As a result, the signal recognition particle (SRP) cannot guide a TA protein to the ER membrane for cotranslational insertion. Hence, they are integrated into the ER membrane post-translationally using their C-terminal end as the anchor. TA proteins...
3.1K
Protein Dynamics in Living Cells
2.1K
Different fluorescence-based techniques are used to study the protein dynamics in living cells. These techniques include FRAP, FRET, and PET.
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
Fluorescent recovery after photobleaching (FRAP) is a fluorescent-protein-based detection technique used to quantify protein movement rates within the cell. This method exposes a small portion of the cell to an intense laser beam. The laser beam causes permanent photobleaching of the fluorophore-tagged proteins in the exposed region. As the bleached...
2.1K


