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相关概念视频

Overview of Metabolism01:40

Overview of Metabolism

Living cells constantly carry out various chemical reactions which are necessary for their proper functioning. These reactions are interlinked to one another via multiple pathways. The collection of these chemical reactions is known as metabolism.
Plant Metabolism
Sunlight, the primary source of energy in plants, is first absorbed by the chlorophyll pigments present in their leaves. Plants then use this energy to carry out photosynthesis, where water is oxidized into oxygen and carbon dioxide...
Drug Metabolism: Phase II Reactions01:14

Drug Metabolism: Phase II Reactions

Phase II reactions are essential for the detoxification and elimination of drugs from the body. These reactions involve the conjugation of parent drugs or their phase I metabolites with endogenous molecules, resulting in more hydrophilic drug conjugates. The primary conjugation reactions in this phase are sulfation and glucuronidation. Both sulfation and glucuronidation typically produce biologically inactive metabolites. However, in some cases involving prodrugs, active metabolites may be...
Parameters Affecting Nonlinear Elimination: Zero-Order Input, First-Order Absorption and Two-Compartment Model01:13

Parameters Affecting Nonlinear Elimination: Zero-Order Input, First-Order Absorption and Two-Compartment Model

Drugs administered through various routes can lead to nonlinear elimination, resulting in complex pharmacokinetic behaviors crucial to understanding efficacious drug dosing.
When a drug is administered through a constant intravenous infusion and eliminated via nonlinear pharmacokinetics, it follows zero-order input. For example, oral drugs undergo first-order absorption upon administration and are eliminated through nonlinear pharmacokinetics.
In the case of subcutaneously administered drugs,...
Microbial Wastewater Treatment01:30

Microbial Wastewater Treatment

Microbial communities in aquatic ecosystems play a key role in the natural breakdown of contaminants introduced through domestic and industrial effluents. Acting as biological catalysts, these microbes change and mineralize a wide range of organic and inorganic pollutants under different redox conditions.In oxygen-rich surface waters, aerobic heterotrophs lead organic matter breakdown, using oxygen as the terminal electron acceptor to efficiently oxidize substrates to carbon dioxide and water.
Methods of Medium Optimization01:28

Methods of Medium Optimization

Optimizing growth media enhances microbial proliferation and maximizes product yield. Statistical experimental design methodologies provide structured and reproducible approaches, offering progressively higher levels of robustness and efficiency.The One-Factor-at-a-Time (OFAT) MethodThe One-Factor-at-a-Time (OFAT) method involves adjusting a single variable while keeping all others constant. However, it cannot detect interactions between variables, often leading to suboptimal outcomes when...
Biological Treatment of Effluent and Waste Water01:30

Biological Treatment of Effluent and Waste Water

Biological wastewater treatment relies on the metabolic activity of microorganisms to remove pollutants from sewage. In modern treatment systems, this process is organized into sequential stages that progressively reduce solid material, dissolved organic matter, and microbial contamination. Each stage plays a distinct role in improving water quality and preparing the effluent for safe discharge or reuse.Primary and Secondary TreatmentPrimary treatment is a physical process that removes large...

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相关实验视频

Updated: Jun 17, 2026

Large Scale Non-targeted Metabolomic Profiling of Serum by Ultra Performance Liquid Chromatography-Mass Spectrometry UPLC-MS
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模块化比较非目标代谢学处理步骤.

Markus Aigensberger1, Christoph Bueschl2, Ezequias Castillo-Lopez3

  • 1Christian Doppler Laboratory for Innovative Gut Health Concepts of Livestock, Austria; BOKU University, Vienna, Dept. IFA-Tulln, Institute of Bioanalytics and Agro-Metabolomics, Tulln, Austria.

Analytica chimica acta
|January 9, 2025
PubMed
概括

选择合适的非定位代谢学软件至关重要,因为不同的工具会产生不同的结果. MS-DIAL显示与手动集成的相似性最大,优化数据处理提高了准确性.

关键词:
阳离子交换色谱学 阳离子交换色谱学数据处理 数据处理质谱测量质量谱测量代谢学 代谢学 代谢学处理 处理 处理

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科学领域:

  • 代谢学 代谢学 代谢学
  • 分析化学 分析化学
  • 生物信息学是一种生物信息学.

背景情况:

  • 非定位代谢学要求强大的数据处理,以获得可靠的见解.
  • 软件工具的选择对分析结果产生重大影响.
  • 对四个常见的代谢学工作流程进行了评估.

研究的目的:

  • 综合评估四个代谢学数据处理工作流程.
  • 为了比较XCMS,复合发现器,MS-DIAL和MZmine的性能.
  • 评估针对非目标代谢学数据的后处理策略.

主要方法:

  • 在牛唾液数据上应用了四种软件工具 (XCMS,化合物发现器,MS-DIAL,MZmine).
  • 分析了离子交换色谱学与高分辨率质谱学数据相结合.
  • 调查了缺失的值赋值,转换,缩放和过策略.

主要成果:

  • 观察到特征检测和重叠的显著差异;所有工具中只有~8%的特征是共同的.
  • MS-DIAL与手动集成的相似性最高,其次是XCMS和MZmine.
  • 用小值计算低丰度特征,自动缩放和低空格过门的数据质量提高.

结论:

  • 工作流的选择极大地影响了非目标的代谢学结果.
  • MS-DIAL提供可靠的功能检测,与手动集成相比较.
  • 优化后处理,特别是缺失值和过,对于准确的代谢分析至关重要.