两相提取用于通过NMR对植物代谢的全面分析
Jan Schripsema1, Denise Dagnino1
1Grupo Metabolômica, Universidade Estadual do Norte Fluminense, Campos dos Goytacazes, RJ, Brazil.
Methods in molecular biology (Clifton, N.J.)
|January 15, 2025
概括
本研究引入了用于全面代谢学分析的双相提取方法. 这种新的方法可以有效地提取极性和非极性代谢物,从而实现准确的量化和识别.
科学领域:
- 代谢学 代谢学 代谢学
- 分析化学 分析化学
- 生物化学 生物化学
背景情况:
- 代谢学旨在捕获完整的代谢指纹进行比较分析.
- 高效的代谢物提取对于获得全面的指纹至关重要,但具有挑战性.
- 现有的方法往往难以有效地提取各种代谢物极性.
研究的目的:
- 开发一套强大的双相提取系统,用于对极地和无极地代谢产物的同时分析.
- 为了利用标准的NMR溶剂来简化化合物识别.
- 通过使用内部标准来实现代谢物的绝对量化.
主要方法:
- 使用了用氧化二 (D2O) 和甲-d (CDCl3) 的双相提取系统.
- 整合了适合的内部标准,用于绝对代谢物量化.
- 与核磁共振 (NMR),液体染色学-质谱学 (LC-MS) 和气体染色学-质谱学 (GC-MS) 兼容的已制备的提取物.
主要成果:
- D2O/CDCl3系统有效提取极性和无极性代谢物.
- 使用标准的NMR数据库,可以直接识别提取的代谢物.
- 绝对量化代谢物是可以实现的,具有很高的准确性.
- 提取物适合通过LC-MS和GC-MS进行下游分析.
结论:
- 描述的两相提取方法为代谢学提供了一个全面的方法.
- 这种技术简化了代谢物识别,并使准确的量化.
- 该方法通过允许多个分析平台来增强代谢学研究的多功能性.
相关概念视频
¹H NMR: Complex Splitting
A proton M that is coupled to a proton X results in doublet signals for M. However, NMR-active nuclei can be simultaneously coupled to more than one nonequivalent nucleus. When M is coupled to a second proton A, such as in styrene oxide, each peak in the doublet is split into another doublet.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied first.
Splitting diagrams or splitting tree diagrams are routinely used to depict such complex couplings. While drawing splitting diagrams, the splitting with the larger coupling constant is usually applied first.
Two-Dimensional (2D) NMR: Overview
The 1D NMR spectrum of large and complex molecules like natural products has complicated splitting patterns and overlapping signals, which can be easily interpreted using 2-dimensional (2D) NMR. Unlike 1D NMR, 2D NMR has two frequency axes that provide the coupling information between the nucleus A and nucleus B in a molecule. The process from which 2D spectra are obtained has four steps.
The first step is the preparation period, during which nucleus A is excited with a radiofrequency pulse.
The first step is the preparation period, during which nucleus A is excited with a radiofrequency pulse.
¹H NMR Signal Integration: Overview
The intensity of a signal, which can be represented by the area under the peak, depends on the number of protons contributing to that signal. The area under each peak is shown as a vertical line called an integral, with the integral value listed under it, as seen in the proton NMR spectrum of benzyl acetate. Each integral value is divided by the smallest integral value to obtain the ratio of the number of protons producing each signal. The ratio reveals the relative number of protons and not...
¹³C NMR: ¹H–¹³C Decoupling
The probability of having two carbon-13 atoms next to each other is negligible because of the low natural abundance of carbon-13. Consequently, peak splitting due to carbon-carbon spin-spin coupling is not observed in spectra. However, protons up to three sigma bonds away split the carbon signal according to the n+1 rule, resulting in complicated spectra.
A broadband decoupling technique is used to simplify these complex, sometimes overlapping, signals. Broadband decoupling relies on a...
A broadband decoupling technique is used to simplify these complex, sometimes overlapping, signals. Broadband decoupling relies on a...
Applications Of NMR In Biology
Nuclear magnetic resonance (NMR) spectroscopy is a very valuable analytical technique for researchers. It has been used for more than 50 years as an analytical tool. F. Bloch and E. Purcell formulated NMR in 1946 and won the 1952 Nobel Prize in Physics for their work. Biological macromolecules such as proteins, nucleic acids, lipids, and organic molecules including pharmaceutical compounds, can be studied using this versatile tool that exploits the magnetic properties of certain nuclei.
The...
The...
2D NMR: Overview of Heteronuclear Correlation Techniques
Heteronuclear correlation spectroscopy is an analytical technique that investigates the coupling between different types of nuclei, often a proton and an X-nucleus, such as carbon-13 or nitrogen-15. This method is commonly used in nuclear magnetic resonance (NMR) spectroscopy to gain insights into complex chemical compounds' structural and compositional aspects. A typical heteronuclear correlation spectrum displays X-nucleus chemical shifts on one axis and a proton spectrum on the other axis.


