完整的线粒体基因组的Niphon spinosus (Perciformes: Niphonidae):基因组的特征和植物遗传学分析
Maheshkumar Prakash Patil1, Jong-Oh Kim2,3, Seung Hyun Yoo3
1Industry-University Cooperation Foundation, Pukyong National University, 45 Yongso-ro, Nam-Gu, Busan 48513, Republic of Korea.
Biomolecules
|January 25, 2025
概括
尼脊状的完整线粒体基因组被测序,揭示了其独特的遗传学位置. 这种鱼与Trachinus draco密切相关,这澄清了它在Percoidei亚系中的进化历史.
科学领域:
- 海洋生物学 海洋生物学
- 基因组学就是基因组学.
- 进化生物学 进化生物学
背景情况:
- 尼螺旋 (Niphon spinosus) 是尼科 (Niphonidae) 唯一的一种,具有复杂且未解决的分类学历史.
- 尼脊状的遗传位置尚不清楚,需要进行分子研究.
研究的目的:
- 为了确定Niphon spinosus的完整线粒体基因组序列.
- 为了阐明尼脊状动物的遗传关系和进化历史.
主要方法:
- 使用下一代技术对完整的线粒体基因组进行测序.
- 线粒体基因组的生物信息分析,包括基因含量和排列.
- 使用13个蛋白质编码基因 (PCG) 来重建家族遗传树.
主要成果:
- 尼脊柱体 (OP391482) 的完整线粒体基因组为16503bp,含有A+T偏差.
- 基因的组成和排列是Percoidei亚序的典型特征,具有独特的链编码.
- 遗传学分析将Niphon spinosus作为Niphonidae中的一个独特的血统,与Trachinus draco密切相关.
结论:
- 线粒体基因组数据为理解Niphon spinosus的分子分类学和分类学提供了基础.
- 这项研究阐明了Niphon spinosus在Percoidei亚系中的进化关系.
- 这些发现将有助于未来对种群遗传学和相关物种进化史的研究.
相关概念视频
Animal Mitochondrial Genetics
7.4K
Among all the organelles in an animal cell, only mitochondria have their own independent genomes. Animal mitochondrial DNA is a double-stranded, closed-circular molecule with around 20,000 base pairs. Mitochondrial DNA is unique in that one of its two strands, the heavy, or H, -strand is guanine rich, whereas the complementary strand is cytosine rich and called the light, or L, -strand. Compared to nuclear DNA, mitochondrial DNA has a very low percentage of non-coding regions and is marked by...
7.4K
Evolutionary Relationships through Genome Comparisons
5.7K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
5.7K
Genomics
35.8K
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
35.8K
Comparing Mitochondrial, Chloroplast, and Prokaryotic Genomes
12.0K
The present-day mitochondrial and chloroplast genomes have retained some of the characteristics of their ancestral prokaryotes and also have acquired new attributes during their evolution within eukaryotic cells. Like prokaryotic genomes, mitochondrial and chloroplast genomes neither bind with histone-like proteins nor show complex packaging into chromosome-like structures, as observed in eukaryotes. Unlike mitotic cell divisions observed in eukaryotic cells, mitochondria and chloroplasts...
12.0K
Gene Evolution - Fast or Slow?
7.0K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
7.0K


