定量结构-活动关系 (QSAR) 模拟Chiral CCR2对手与多维空间的新奇奇性描述器的模型
Ramanathan Natarajan1, Ganapathy S Natarajan2, Subhash C Basak3
1Department of Research and Development, Saranathan College of Engineering, Panjappur, Tiruchirappalli 620 012, Tamil Nadu, India.
Molecules (Basel, Switzerland)
|January 25, 2025
概括
新的相对性指数 (RCI) 为定量性结构-活动关系 (QCSAR) 建模创造了一个多维空间. 这种方法增强了对性分子活性的预测,这对于药物发现和其他行业至关重要.
科学领域:
- * 化学信息学 化学信息学
- * 医学化学 医学化学
- * 计算化学 计算机化学
背景情况:
- * 奇拉性在制药,农业和毒理学中至关重要.
- * 定量性奇拉性结构-活动关系 (QCSAR) 建模需要强大的奇拉性描述器.
- * 现有的描述符可能无法完全捕捉出奇拉分子的复杂性.
研究的目的:
- *为QCSAR建模引入新的相对性指数 (RCI).
- * 探索多维描述器空间对奇拉分子的实用性.
- *使用RCI开发CCR2抗剂的预测模型.
主要方法:
- * 计算了20种CCR2抗剂的198种新型相对性指数 (RCI).
- *主要组件分析 (PCA) 的应用,以减少数据.
- *使用主要组件分数 (PCS) 和选定的RCI开发线性回归模型.
主要成果:
- *PCA将描述符空间缩小到八个主要组件 (PC).
- *使用PCS的三预测模型实现了R2 = 0.823.
- *一个使用三个RCI的模型产生了R2 = 0.742和交叉验证Rcv2 = 0.839.
结论:
- *新型RCI为QCSAR提供了一个强大的多维空间.
- * RCI方法有效地描述了预测建模的奇拉性.
- * 这种方法增强了对奇拉化合物的QCSAR模型的开发.
相关概念视频
Prochirality
3.8K
The concept of prochirality leads to the nomenclature of the individual faces of a molecule and plays a crucial role in the enantioselective reaction. It is a concept where two or more achiral molecules react to produce chiral products. A typical process is the reaction of an achiral ketone to generate a chiral alcohol. Here, the achiral reactant reacts with an achiral reducing agent, sodium borohydride, to generate an equimolar mixture of the chiral enantiomers of the product. For example, an...
3.8K
Molecules with Multiple Chiral Centers
11.2K
Molecules that possess multiple chiral centers can afford a large number of stereoisomers. For instance, while some molecules like 2-butanol have one chiral center, defined as a tetrahedral carbon atom with four different substituents attached, several molecules like butane-2,3-diol have multiple chiral centers. A simple formula to predict the number of stereoisomers possible for a molecule with n chiral centers is 2n. However, there can be a lower number where some of the stereoisomers are...
11.2K
Chirality at Nitrogen, Phosphorus, and Sulfur
5.7K
Chirality is most prevalent in carbon-based tetrahedral compounds, but this important facet of molecular symmetry extends to sp3-hybridized nitrogen, phosphorus and sulfur centers, including trivalent molecules with lone pairs. Here, the lone pair behaves as a functional group in addition to the other three substituents to form an analogous tetrahedral center that can be chiral.
A consequence of chirality is the need for enantiomeric resolution. While this is theoretically possible for all...
A consequence of chirality is the need for enantiomeric resolution. While this is theoretically possible for all...
5.7K
Naming Enantiomers
19.8K
The naming of enantiomers employs the Cahn–Ingold–Prelog rules that involve assigning priorities to different substituent groups at a chiral center. Each enantiomer, being a distinct molecule, is assigned a unique name by the Cahn–Ingold–Prelog (CIP) rules, also called the R–S system. The prefix R- or S- attached to the chiral centers in an enantiomer is dependent on the spatial arrangement of the four substituents on the chiral center. The R–S system...
19.8K
Chirality
23.0K
Chirality is a term that describes the lack of mirror symmetry in an object. In other words, chiral objects cannot be superposed on their mirror images. For example, our feet are chiral, as the mirror image of the left foot, the right foot, cannot be superposed on the left foot.
Chiral objects exhibit a sense of handedness when they interact with another chiral object. For example, our left foot can only fit in the left shoe and not in the right shoe. Achiral objects — objects that have...
Chiral objects exhibit a sense of handedness when they interact with another chiral object. For example, our left foot can only fit in the left shoe and not in the right shoe. Achiral objects — objects that have...
23.0K
Chirality in Nature
12.8K
Chirality is the most intriguing yet essential facet of nature, governing life’s biochemical processes and precision. It can be observed from a snail shell pattern in a macroscopic world to an amino acid, the minutest building block of life. Most of the snails around the world have right-coiled shells because of the intrinsic chirality in their genes. All the amino acids present in the human body exist in an enantiomerically pure state, except for glycine - the sole achiral amino acid.
12.8K


