相关实验视频
Updated: May 30, 2025

09:36
Unbiased Deep Sequencing of RNA Viruses from Clinical Samples
Published on: July 2, 2016
16.9K
在Omicron时代的多个SARS-CoV-2感染的下一代测序
Marzia Cavalli1, Giulia Campoli2, Anna Anselmo2
1Defence Institute for Biomedical Sciences, 00184, Rome, Italy. marzia.cavalli@persociv.difesa.it.
Scientific reports
|January 27, 2025
概括
调查SARS-CoV-2再感染,这项研究分析了超过40万个样本. 两例儿科病例突出了快速再感染的动态,包括未接种疫苗的儿童可能出现早期的BA.5/BA.5再感染.
科学领域:
- 病毒学 病毒学
- 免疫学 免疫学 免疫学
- 流行病学 流行病学
背景情况:
- 严重急性呼吸系统综合征冠状病毒2 (SARS-CoV-2) 变种可以逃避先前感染或接种疫苗的免疫力,导致再感染.
- 了解再感染模式对于管理正在进行的流行病浪潮和评估疫苗/感染诱导的保护至关重要.
研究的目的:
- 调查SARS-CoV-2再感染病例,重点关注再感染和病毒持久性之间的区别.
- 为了分析特定的儿科病例的快速再感染.
主要方法:
- 使用SARS-CoV-2流行病数据进行的回顾性描述性研究.
- 逆转录酶定量聚合酶链反应 (RT-qPCR) 在416466个鼻口口腔拭子上.
- 下一代测序 (NGS) 在10380个选定的样本上.
主要成果:
- 通过RT-qPCR确定了350例再感染病例,其中228例通过NGS进一步分析.
- 对两名未接种疫苗的儿科患者进行了详细分析,结果在60天内呈阳性.
- 一个病例可能代表了18个月大的孩子BA.5/BA.5再感染的早期实例.
结论:
- 这项研究提供了SARS-CoV-2再感染的动态,特别是在未接种疫苗的儿科人群中.
- 这些发现强调了基因组监测对于跟踪病毒演变和再感染事件的重要性.
相关概念视频
Next-generation Sequencing
87.2K
The first human genome sequencing project cost $2.7 billion and was declared complete in 2003, after 15 years of international cooperation and collaboration between several research teams and funding agencies. Today, with the advent of next-generation sequencing technologies, the cost and time of sequencing a human genome have dropped over 100 fold.
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....
Next-Generation Sequencing Methods
Although all next-generation methods use different technologies, they all share a set of standard features....
87.2K
Genomics
35.8K
Genomics is the science of genomes: it is the study of all the genetic material of an organism. In humans, the genome consists of information carried in 23 pairs of chromosomes in the nucleus, as well as mitochondrial DNA. In genomics, both coding and non-coding DNA is sequenced and analyzed. Genomics allows a better understanding of all living things, their evolution, and their diversity. It has a myriad of uses: for example, to build phylogenetic trees, to improve productivity and...
35.8K
RNA-seq
9.8K
RNA sequencing, or RNA-Seq, is a high-throughput sequencing technology used to study the transcriptome of a cell. Transcriptomics helps to interpret the functional elements of a genome and identify the molecular constituents of an organism. Additionally, it also helps in understanding the development of an organism and the occurrence of diseases.
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
Before the discovery of RNA-seq, microarray-based methods and Sanger sequencing were used for transcriptome analysis. However, while...
9.8K
Single Nucleotide Polymorphisms-SNPs
13.9K
A single nucleotide polymorphism or SNP is a single nucleotide variation at a specific genomic position in a large population. It is the most prevalent type of sequence variation found in the human genome. Point mutations that occur in more than 1% of the population qualify as SNPs. These are present once every 1000 nucleotides on an average in the human genome. Replacement of a purine with another purine (A/G) or a pyrimidine with another pyrimidine (C/T) is known as a transition. In contrast,...
13.9K
Sanger Sequencing
752.6K
DNA sequencing is a fundamental technique that is routinely used in the biological sciences. This method can be applied to a range of questions at different scales - from the sequencing of a cloned DNA fragment or the study of a mutation in a gene up to whole-genome sequencing. However, despite the widespread use of sequencing today, it was not until 1977 that Fredrick Sanger and his collaborators developed the chain-termination method to decode DNA sequences. It relies on the separation of a...
752.6K
Maxam-Gilbert Sequencing
11.1K
In the same year as the discovery of the Sanger sequencing method, another group of scientists, Allan Maxam and Walter Gilbert, demonstrated their chemical-cleavage method for DNA sequencing. The Maxam-Gilbert method relies on using different chemicals that can cleave the DNA sequence at specific sites, the separation of resulting DNA fragments of variable size using electrophoresis, and deciphering the DNA sequence from the resulting gel bands.
Challenges of the Maxam-Gilbert Method
The...
Challenges of the Maxam-Gilbert Method
The...
11.1K

