开放PVSignal知识图:在计算可利用的 FAIR 表示中报告药监信号
Achilleas Chytas1, George Gavriilides1, Anargyros Kapetanakis1
1Institute of Applied Biosciences, Centre for Research and Technology Hellas, Thessaloniki, Greece.
Drug safety
|February 8, 2025
概括
一个新的数据模型,OpenPVSignal,将非结构化药监报告转化为可计算的格式. 这使得药物安全数据更容易整合到处理管道中,以加强药物安全监督.
科学领域:
- 药监和药物安全 药监和药物安全
- 数据科学和知识表示数据科学和知识表示
- 计算药理学计算药理学
背景情况:
- 药监信号报告 (PVSR) 文件提供了对药物相关不良影响的关键初步见解,但通常是无结构的.
- PVSRs的自由文本格式阻碍了它们融入用于药物安全信号调查和临床决策的数据处理管道.
研究的目的:
- 引入OpenPVSignal,这是一个数据模型,旨在以计算可利用的格式发布PVSR.
- 确保遵守FAIR原则 (可查找,可访问,可互操作,可重复使用) 以改善数据访问和可重复使用.
主要方法:
- 从世界卫生组织乌普萨拉监测中心 (WHO-UMC) 转换到OpenPVSignal数据模型的药监信号.
- 从转换的数据中开发一个知识图 (KG).
- 由KG工程师进行技术验证,由医疗和药监专家进行质量验证.
主要成果:
- 一个知识图 (KG) 从101个PVSR跨越2011-2019成功创建.
- 由此产生的KG是公开可用的,促进了对结构化药监数据的更广泛访问.
结论:
- 开发的知识图 (KG) 是数据处理管道的宝贵资源.
- 这种KG可以显著支持参与药物安全活动和信号检测的系统.
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