通过2bRAD-M对2bRAD-M的低生物质母婴微生物体的特征,揭示了早期微生物殖民概况
Shuwen Hou1, Yuesong Jiang1, Feng Zhang2
1Division of Applied Oral Sciences and Community Dental Care, Faculty of Dentistry, The University of Hong Kong, Hong Kong SAR, China.
Frontiers in microbiology
|February 10, 2025
概括
微生物组的IIB型限制酶位点相关DNA测序 (2bRAD-M) 准确地描述了婴儿和母亲的微生物组. 这种方法克服了低生物质的挑战,提供了对早期生命微生物殖民和健康的见解.
科学领域:
- 微生物学 微生物学
- 基因组学就是基因组学.
- 人类健康 人类健康 人类健康
背景情况:
- 人类母乳和婴儿的微生物组成对免疫发育和长期健康至关重要.
- 传统方法面临着微生物生物量较低的挑战,限制了分析这些样本的分辨率.
研究的目的:
- 为了评估IIB类型的限制酶与微生物组 (2bRAD-M) 相关的DNA测序作为一种减少的元基因组学方法.
- 描述母乳,母体便和婴儿中的物种级微生物组成.
- 为了比较2bRAD-M与16S rRNA amplicon测序和整个元基因组学测序 (WMS).
主要方法:
- 采用了2bRAD-M,一种减少的元基因组学技术.
- 收集了人类母乳,母体便和婴儿样.
- 将2bRAD-M结果与16S rRNA amplicon测序和WMS进行比较.
主要成果:
- 2bRAD-M与WMS相比,在微生物丰富度和社区级距离较低方面表现出高相关性.
- 该方法准确地确定了与婴儿微生物群变异相关的临床变量.
- 在不同的哺乳阶段观察到微生物多样性的显著变化.
结论:
- 2bRAD-M是一种准确而强大的方法,用于分析低生物质的母婴样本.
- 这种技术增强了对生命早期微生物殖民的理解.
- 2bRAD-M显示了大规模和纵向微生物组研究的翻译潜力.
相关概念视频
Anatomy of the Intestines
65.2K
Although digestion of proteins, carbohydrates, and lipids may begin in the stomach, it is completed in the intestine. The absorption of nutrients, water, and electrolytes from food and drink also occurs in the intestine. The intestines can be divided into two structurally distinct organs—the small and large intestines.
Small Intestines
The small intestine is an ~7 meter-long tube with an inner diameter of just 2.5 cm. Since most nutrients are absorbed here, the inner lining of the...
Small Intestines
The small intestine is an ~7 meter-long tube with an inner diameter of just 2.5 cm. Since most nutrients are absorbed here, the inner lining of the...
65.2K
Methods to Assess Microbial Communities
58
Microbial communities, comprising bacteria, archaea, and eukaryotic microorganisms, inhabit diverse ecosystems and play crucial roles in environmental and biological processes. Their diversity is defined by three main parameters: species richness (the number of distinct species), species abundance (the relative quantity of each species), and species evenness (how uniformly individual species are distributed in various locations). These factors together shape the structure and ecological balance...
58
Introduction to the Human Microbiota
199
Microorganisms colonize various regions of the human body, including the mouth, nasal passages, throat, stomach, intestines, urogenital tract, and skin. The total number of microbial cells is estimated to range from 10¹³ to 10¹⁴—comparable to, or exceeding, the number of human somatic cells. This host–microbiome relationship has led to the conceptualization of humans as supraorganisms, wherein microbial communities perform vital roles in development, immunity,...
199
Development of Human Microbiota
61
The human microbiota begins developing at birth and undergoes continual change as we age. Infancy marks a critical period of microbial sensitivity, offering a “window of opportunity” during which beneficial microbes help mature the immune system. By age three, children typically develop a more stable and diverse microbial community. Newborns acquire microbes from their immediate environment; vaginal delivery favors maternal vaginal microbes, while cesarean births favor microbes from...
61
Development of the Oral Microbiota
65
The establishment of the oral microbiome begins before birth, challenging the long-held belief that the fetal oral cavity is sterile. The presence of oral microbes such as Streptococcus and Fusobacterium in amniotic fluid suggests that microbial exposure may occur in utero, potentially through translocation from the maternal oral or gastrointestinal tract. This early colonization primes the neonatal immune system and sets the stage for subsequent microbial succession. Maternal health,...
65
Microbiota of the Respiratory Tract
55
The human respiratory tract, comprising the upper and lower segments, serves as a critical interface with the external environment. The upper respiratory tract (URT)—including the nostrils, sinuses, pharynx, and oropharynx—is heavily colonized by microbes, while the lower respiratory tract (LRT), composed of the larynx, trachea, bronchi, and lungs, was long thought to be sterile. However, recent molecular studies have revealed that the lungs are not devoid of microbes but act more...
55


