基于综合生物信息学和单细胞RNA-seq分析,探索牛皮关节炎和衰老的共同分子机制
Shuang Liu1, Peng Pu1, Qing Xiang1
1Yu-Yue Pathology Scientific Research Center, China.
Biochimica et biophysica acta. Molecular basis of disease
|February 18, 2025
概括
这项研究确定了牛皮关节炎 (PSA) 和衰老之间的共享基因,在两者中都发现了CD8-CM上调. 关键基因TGFBR3,PPP3CC和APOBEC3G与PSA有因果关系,为病原和治疗提供了洞察力.
科学领域:
- 免疫学 免疫学 免疫学
- 遗传学 是一个遗传学.
- 衰老研究研究 衰老研究
背景情况:
- 牛皮关节炎 (PsA) 和衰老共享复杂的生物机制.
- 了解共同的遗传因素对于开发有效的治疗方法至关重要.
研究的目的:
- 为了确定关键的基因和细胞通路,共同的PsA和衰老.
- 探索这些共享基因与PsA病变发生之间的因果关系.
主要方法:
- 来自PsA患者和老年人群的综合单细胞RNA测序数据.
- 分析了细胞亚群,基因表达和细胞通信.
- 采用孟德尔随机化和KEGG途径分析来识别关键的基因和途径.
主要成果:
- 在PsA和老年人群中,CD8-CM T细胞子集表达被上调.
- 确定了98个差异表达的基因,其中TGFBR3,PPP3CC和APOBEC3G显示与PSA的因果关系.
- 凯格基因分析显示了与这些关键基因相关的丰富代谢途径.
结论:
- CD8-CM上调是PsA和衰老的一个共同特征.
- TGFBR3,PPP3CC和APOBEC3G被确定为共享病变发生的关键基因.
- 这些发现为PsA和衰老的联合治疗策略提供了新的见解.
更多相关视频
06:24Multiplexed Analysis of Retinal Gene Expression and Chromatin Accessibility Using scRNA-Seq and scATAC-Seq
Published on: March 12, 2021
3.5K
14:28Substructure Analyzer: A User-Friendly Workflow for Rapid Exploration and Accurate Analysis of Cellular Bodies in Fluorescence Microscopy Images
Published on: July 15, 2020
7.8K
相关概念视频
Aging
35
Aging is a complex biological phenomenon influenced by various processes that affect cellular and systemic functions. Several prominent theories attempt to explain its mechanisms, highlighting cellular limitations, oxidative damage, and hormonal changes as central factors in aging.
Cellular Clock Theory
The cellular clock theory posits that the human lifespan is closely tied to the finite capacity of cells to divide, a phenomenon governed by telomeres, which are protective caps at the ends of...
Cellular Clock Theory
The cellular clock theory posits that the human lifespan is closely tied to the finite capacity of cells to divide, a phenomenon governed by telomeres, which are protective caps at the ends of...
35
Genome-wide Association Studies-GWAS
12.3K
Genome-wide association studies or GWAS are used to identify whether common SNPs are associated with certain diseases. Suppose specific SNPs are more frequently observed in individuals with a particular disease than those without the disease. In that case, those SNPs are said to be associated with the disease. Chi-square analysis is performed to check the probability of the allele likely to be associated with the disease.
GWAS does not require the identification of the target gene involved in...
GWAS does not require the identification of the target gene involved in...
12.3K
Ribosome Profiling
3.5K
Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
3.5K
Mitochondria
9.7K
Mitochondria are eukaryotic cellular organelles that are known to produce energy through a process called oxidative phosphorylation. Besides their primary function, mitochondria are involved in various cellular processes, including cell growth, differentiation, signaling, metabolism, and senescence. Age-related changes cause a decline in mitochondrial quality and integrity due to increased mitochondrial mutations and oxidative damage. Thus, aging can severely impact mitochondrial functions,...
9.7K
