结直肠癌患者的HERV调节:内源性逆转录病毒转录组的快照
Nicole Grandi1, Ching-Hsuan Liu2,3, Saili Chabukswar1,4
1Laboratory of Molecular Virology, Department of Life and Environmental Sciences, University of Cagliari, Cagliari, Italy.
Journal of medical virology
|February 24, 2025
概括
人体内源逆转录病毒 (HERVs) 在结直肠癌 (CRC) 中表现异常. 研究人员确定了在CRC瘤中高调的特定HERV-H转录,这表明它可能在癌症进展中发挥作用.
科学领域:
- 基因组学就是基因组学.
- 在瘤学瘤学.
- 病毒学 病毒学
背景情况:
- 人体内源逆转录病毒 (HERVs) 是古老的病毒残留物,集成到灵长类动物基因组中.
- 在包括癌症在内的疾病状态中,HERV表达可能会发生变化,但结直肠癌 (CRC) 中的特定位置没有得到很好的特征.
- 了解HERV调制对于阐明复杂疾病病因至关重要.
研究的目的:
- 调查约3300个HERV位点在结对结直肠癌 (CRC) 和正常组织中的特定表达模式.
- 确定在CRC中显著调节的HERV位点,并描述它们的表达趋势.
主要方法:
- 从7名CRC患者的结合瘤和正常组织的转录组分析.
- 一个新的转录组重建.
- 定量实时PCR (qPCR) 验证.量化实时PCR (qPCR) 验证.
主要成果:
- 在CRC组织中,HERVs被显著调节,总体趋势是向下调节.
- 在高调节的HERV中,有23种属于HERV-H组.
- 来自Xp22.3染色体的HERV-H转录在CRC中显示出高特异性表达,并可能编码部分Pol蛋白.
结论:
- 这项研究提供了HERV转录CRC变异的详细地图,突出了个体间的变异性.
- 在CRC中发现的一种特定的HERV-H转录值得进一步研究其在瘤进展中的潜在作用.
相关概念视频
Non-LTR Retrotransposons
11.3K
As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
11.3K
Mechanisms of Retrovirus-induced Cancers
5.0K
Retroviruses are RNA viruses that have been shown to cause cancers in diverse species, including chickens, mice, cats, and monkeys. The RNA genomes of these viruses are first reverse-transcribed into single and then double-stranded DNA (dsDNA) copies. This dsDNA called proviral DNA then integrates into the host genome. Subsequently, the host cell transcribes the proviral DNA in concert with the chromosomal DNA. This leads to the production of viral RNA and proteins that assemble at the host...
5.0K
Rous Sarcoma Virus (RSV) and Cancer
4.9K
Rous Sarcoma virus or RSV was discovered by F. Peyton Rous in the year 1911 as a filterable transmissible agent that could cause tumors in chickens. He won a Nobel Prize for this discovery in 1966. His experiments clearly demonstrated that some cancers could be caused by infectious agents and led to the discovery of many more cancer-causing viruses in animals as well as humans.
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
4.9K
Retrovirus Life Cycles
45.6K
Retroviruses have a single-stranded RNA genome that undergoes a special form of replication. Once the retrovirus has entered the host cell, an enzyme called reverse transcriptase synthesizes double-stranded DNA from the retroviral RNA genome. This DNA copy of the genome is then integrated into the host’s genome inside the nucleus via an enzyme called integrase. Consequently, the retroviral genome is transcribed into RNA whenever the host’s genome is transcribed, allowing the...
45.6K
Retroviruses
12.2K
Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
12.2K


