植物DNA条形码作为基因组资源的全球可用性,以支持基础和政策相关的生物多样性研究
Tyler R Kartzinel1,2, Hannah K Hoff1,2, Timothy J Divoll3
1Department of Ecology, Evolution, & Organismal Biology, Brown University, Providence, Rhode Island, USA.
Molecular ecology
|February 28, 2025
概括
DNA条形码有助于生物多样性监测,但参考数据缺口仍然存在. 提高全球植物DNA条形码覆盖率对于保护和公平获取遗传资源至关重要.
科学领域:
- 生物多样性科学是生物多样性的科学.
- 基因组技术 基因组技术
- 保护生物学 保护生物学
背景情况:
- DNA 条形码提供了成本效益高的生物多样性监测,特别是在具有挑战性的热点地区.
- 有效使用DNA条形码依赖于全面的参考数据.
- 现有的公共存储库包含超过373,584个植物DNA条形码.
研究的目的:
- 评估公共植物DNA条形码参考数据的覆盖范围.
- 识别分类学和地理代表性的差距.
- 评估这些差距对生物多样性科学和保护的影响.
主要方法:
- 从公共存储库中审查了超过373,584个植物DNA条形码.
- 对现存陆地植物物种 (胚胎植物) 的分类学和地理覆盖面的分析.
- 识别缺乏基本参考数据的家庭和地区.
主要成果:
- 公共存储库覆盖已知陆地植物物种的约25%.
- 存在显著的覆盖差距,特别是在热带生物多样性热点地区,反映了历史偏见.
- 至少17%的植物家族缺乏任何参考条形码数据,影响热带和温带地区.
结论:
- 当前的参考数据集具有关键的地理和分类学差距,危及下游应用.
- 需要采取战略努力,以改善全球DNA条形码数据覆盖率.
- 加强数据覆盖对于有效保护生物多样性和公平分享遗传资源的好处至关重要.
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