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相关概念视频

Histone Modification02:32

Histone Modification

13.0K
The histone proteins have a flexible N-terminal tail extending out from the nucleosome. These histone tails are often subjected to post-translational modifications such as acetylation, methylation, phosphorylation, and ubiquitination. Particular combinations of these modifications form “histone codes” that influence the chromatin folding and tissue-specific gene expression.
Acetylation
The enzyme histone acetyltransferase adds acetyl group to the histones. Another enzyme, histone...
13.0K
Spreading of Chromatin Modifications02:25

Spreading of Chromatin Modifications

8.2K
The histone proteins in the nucleosomes are post-translationally modified (PTM) to increase or decrease access to DNA. The commonly observed PTMs are methylation, acetylation, phosphorylation, and ubiquitination of lysine amino acids in the histone H3 tail region. These histone modifications have specific meaning for the cell. Hence, they are called "histone code". The protein complex involved in histone modification is termed as "reader-writer" complex.
Writers
The writer...
8.2K
Nucleosome Remodeling02:54

Nucleosome Remodeling

8.9K
Nucleosomes are the basic units of chromatin compaction. Each nucleosome consists of the DNA bound tightly around a histone core, which makes the DNA inaccessible to DNA binding proteins such as DNA polymerase and RNA polymerase. Hence, the fundamental problem is to ensure access to DNA when appropriate, despite the compact and protective chromatin structure.
Nucleosome remodeling complex
Eukaryotic cells have specialized enzymes called ATP-dependent nucleosome remodeling enzymes. These enzymes...
8.9K
The Nucleosome Core Particle01:12

The Nucleosome Core Particle

829
Nucleosomes are the DNA-histone complex, where the DNA strand is wound around the histone core. The histone core is an octamer containing two copies of H2A, H2B, H3, and H4 histone proteins.
Nucleosomes, paradoxically, perform two opposite functions simultaneously. On the one hand, their primary aim is to protect the delicate DNA strands from physical damage and help achieve a higher compaction ratio. On the other hand, they must allow polymerase enzymes to access histone-bound DNA during...
829
Euchromatin01:01

Euchromatin

6.8K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions take up more dye, appearing darker, while the less-compact areas take up less dye and appear lighter. Based on the compaction level, chromatins are classified into two primary forms – euchromatin and heterochromatin.
Euchromatin is the less dense region of the chromatin and stains lighter. Euchromatin contains histone H3 extensively...
6.8K
Heterochromatin02:38

Heterochromatin

9.5K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
9.5K

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相关实验视频

Updated: May 24, 2025

Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers
10:28

Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers

Published on: September 20, 2018

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连接的染色体放大了乙化调节的核细胞相互作用.

Rina Li1, Xingcheng Lin1,2

  • 1Department of Physics, North Carolina State University, Raleigh, North Carolina 27607, United States.

Biochemistry
|March 3, 2025
PubMed
概括

基因组乙化,特别是H4K16ac,稳定了核体,并削弱了它们之间的相互作用. 这导致染色质分解,通过暴露核细胞体来促进基因转录.

科学领域:

  • 分子生物学分子生物学
  • 生物物理学的生物物理.
  • 染色体动力学 染色体动力学

背景情况:

  • 希斯乙化是一种关键的表观遗传标记,调节基因转录.
  • H4K16乙化 (H4K16ac) 是已知的基因激活和开放色素的标记物.
  • 对于H4K16ac对高阶染色体结构的影响尚不完全理解.

研究的目的:

  • 为了研究基因组尾部修饰,特别是H4K16ac,如何影响核细胞稳定性和更高阶染色体组织.
  • 为了弥合局部化学修饰和全球色素结构之间的差距.

主要方法:

  • 使用了残留分辨率粗粒度染色体模型.
  • 采用了增强的采样技术来模拟乙化效应.
  • 模拟核细胞稳定性,核细胞间相互作用和染色体结构.

主要成果:

  • H4K16ac通过在DNA解过程中减少基因尾来稳定单个核体.
  • 乙化通过减少基因组尾巴,DNA和酸性斑块之间的接触来削弱核细胞间相互作用.
  • 削弱的相互作用,由链接DNA放大,导致染色质脱离和分解,增加转录的可访问性.

结论:

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Deciphering Molecular Mechanism of Histone Assembly by DNA Curtain Technique
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Site Specific Lysine Acetylation of Histones for Nucleosome Reconstitution using Genetic Code Expansion in Escherichia coli
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Site Specific Lysine Acetylation of Histones for Nucleosome Reconstitution using Genetic Code Expansion in Escherichia coli

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相关实验视频

Last Updated: May 24, 2025

Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers
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Repressing Gene Transcription by Redirecting Cellular Machinery with Chemical Epigenetic Modifiers

Published on: September 20, 2018

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Deciphering Molecular Mechanism of Histone Assembly by DNA Curtain Technique
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Deciphering Molecular Mechanism of Histone Assembly by DNA Curtain Technique

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Site Specific Lysine Acetylation of Histones for Nucleosome Reconstitution using Genetic Code Expansion in Escherichia coli
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Site Specific Lysine Acetylation of Histones for Nucleosome Reconstitution using Genetic Code Expansion in Escherichia coli

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  • 激素乙化,特别是H4K16ac,在调节染色质结构和可访问性方面发挥着重要作用.
  • 染色体内的DNA的几何约束对于调解由翻译后修饰引起的结构变化至关重要.