相关实验视频
Updated: May 17, 2025

13:10
Use of Alu Element Containing Minigenes to Analyze Circular RNAs
Published on: March 10, 2020
7.3K
倒置的Alu在循环中重复-exon跨越原始人进化过程中跳过
Danielle Denisko1,2, Jeonghyeon Kim1,3, Jayoung Ku1,4,5
1Division of Genetics and Genomics, Boston Children's Hospital and Harvard Medical School, Boston, MA 02115, USA.
bioRxiv : the preprint server for biology
|March 31, 2025
概括
内子中的倒置的Alu元素可以通过形成RNA干环来引起外子跳转,从而影响人类和灵长类动物的基因进化. 这项研究揭示了它们的流行程度和对转录基因创新的影响.
科学领域:
- 基因组学就是基因组学.
- 分子生物学分子生物学
- 进化生物学 进化生物学
背景情况:
- RNA拼接使人类基因组的功能格局多样化.
- 距离内基序列在RNA拼接中的作用尚未得到充分研究.
- 倒置的Alu元素可能会形成RNA干循环,促进外子跳转.
研究的目的:
- 系统地分析人类基因组中的倒置Alu对.
- 评估它们对通过预测的RNA干循环形成的外子跳跃的影响.
- 为了确定它们与人类进化的相关性.
主要方法:
- 对倒置的Alu对进行全基因组分析.
- 预测RNA干循环的形成.
- 在九种灵长类动物中进行比较基因组分析.
- 实验验证对外显子跳转的验证.
主要成果:
- 倒置的Alu对,特别是AluY-AluSx1和AluSz-AluSx,在可以跳过的前子附近得到丰富.
- 对于这些倒置的Alu对来说,可以预测稳定的茎环结构.
- 特定于类人猿的Alu插入形成了反向对,富含无处不在途径基因的可跳过的前体.
- 实验验证证证实了由类人体特异的倒置阿卢对介导的外显子跳转.
结论:
- 倒置的Alu对有助于转录基因层面的基因组创新.
- 这项工作突出了人类类动物中可转移元素介导进化的新机制.
相关概念视频
Exon Recombination
3.5K
The evolution of new genes is critical for speciation. Exon recombination, also known as exon shuffling or domain shuffling, is an important means of new gene formation. It is observed across vertebrates, invertebrates, and in some plants such as potatoes and sunflowers. During exon recombination, exons from the same or different genes recombine and produce new exon-intron combinations, which might evolve into new genes.
Exon shuffling follows “splice frame rules.” Each exon...
Exon shuffling follows “splice frame rules.” Each exon...
3.5K
Gene Duplication and Divergence
6.0K
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
6.0K
Non-LTR Retrotransposons
11.3K
As the name suggests, non-LTR retrotransposons lack the long terminal repeats characteristic of the LTR retrotransposons. Additionally, both LTR and non-LTR retrotransposons use distinct mechanisms of mobilization. Non-LTR retrotransposons are further divided into two classes - Long interspersed nuclear elements (LINEs) and short interspersed nuclear elements (SINEs), both of which occur abundantly in most mammals, including humans. Some of the active non-LTR retrotransposons in humans are L1...
11.3K
RNA Splicing
55.8K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
55.8K
LTR Retrotransposons
17.3K
LTR retrotransposons are class I transposable elements with long terminal repeats flanking an internal coding region. These elements are less abundant in mammals compared to other class I transposable elements. About 8 percent of human genomic DNA comprises LTR retrotransposons. Some of the common examples of LTR retrotransposons are Ty elements in yeast and Copia elements in Drosophila.
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
17.3K
Alternative RNA Splicing
20.9K
Alternative RNA splicing is the regulated splicing of exons and introns to produce different mature mRNAs from a single pre-mRNA. Unlike in constitutive splicing where a single gene produces a single type of mRNA, alternative splicing allows an organism to produce multiple proteins from a single gene and plays an important role in protein diversity.
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
There are five types of alternative RNA splicing that vary in the ways the pre-mRNA segments are removed or retained in the mature mRNA. The first...
20.9K

