EcoNicheS:使用闪亮的仪表板和R包增强生态利基模型,利基重叠和连接分析
Armando Sunny1,2, Clere Marmolejo1,2, Rodrigo Vidal-López2
1Centro de Investigación en Ciencias Biológicas Aplicadas, Facultad de Ciencias, Universidad Autónoma del Estado de México, Toluca, Estado de México, Mexico.
PeerJ
|April 1, 2025
概括
EcoNicheS是一个新的R包,简化了生态利基模型 (ENM) 和景观连接分析. 它为生态学和保护科学研究人员提供了可访问的工作流.
科学领域:
- 生态建模 生态建模
- 保护科学是一种保护科学.
- 生物地理学 生物地理学 生物地理学
背景情况:
- 生态利基模型 (ENM) 和景观连接性分析对于了解物种分布和保护需求至关重要.
- 现有的工具往往具有技术复杂性,限制了研究人员的可访问性.
- 需要为这些分析提供集成的,用户友好的平台.
研究的目的:
- 推出EcoNicheS,一个带有Shiny仪表板的R包,旨在简化ENM和景观连接建模.
- 为数据输入,模型参数化和结果可视化提供可访问和直观的工作流.
- 在生态研究中弥合先进的建模技术和用户可访问性之间的差距.
主要方法:
- EcoNicheS利用biomod2套件在利基和连接性建模中提供强大的算法.
- 它为数据处理提供了一个交互式界面,包括伪缺席点生成和城市化过器.
- 该包整合了利基模型,重叠分析和生态连接模型的工具.
主要成果:
- EcoNicheS为ENM和连接分析提供了一个全面和简化的工作流.
- 该软件包促进了动态输出可视化,强调可复制性和可比性.
- 它将创新的工作流与一个用户友好的界面集成在一起.
结论:
- EcoNicheS简化了复杂的生态建模任务,使其更容易被广泛的研究人员所理解.
- 该包是各种领域的宝贵资源,包括生物地理学,流行病学和保护生物学.
- 通过提高可访问性和集成的工作流程,EcoNicheS促进了生态和保护科学的进步.
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