多视图对比学习用于在异质生物网络上重新定位药物
IEEE journal of biomedical and health informatics
|April 10, 2025
概括
这项研究介绍了MICLE,这是一种用于药物疾病关联预测的新型多视图对比学习方法. MICLE有效地整合了异构的生物网络,并增强了代表性学习,以加速药物发现.
科学领域:
- 生物信息学是一种生物信息学.
- 计算生物学 计算生物学
- 药理学 药理学是指药理学的学科.
背景情况:
- 药物重新定位通过确定现有药物的新用途来加速药物发现.
- 图形对比学习 (GCL) 解决了预测药物疾病关联 (DDAs) 的数据稀疏性.
- 对于DDAs,现有的GCL方法忽视了网络异质性,缺乏强大的视图增强策略.
研究的目的:
- 提出MICLE,一种新的多视图对比学习方法,用于增强DDA预测.
- 将异质生物网络属性纳入DDA预测中.
- 开发一种非随机对比的视图增强技术.
主要方法:
- 通过将与蛋白质相关的二分位图与DDA网络集成,构建了一个异质生物网络 (HBN).
- 使用异质图形神经网络从HBN中提取模式.
- 设计用于代表性学习的互补的面试和内视对比学习任务.
主要成果:
- 在三个基准数据集中,MICLE在预测DDA方面表现出显著的有效性.
- 该方法成功地利用异质网络信息来改善预测.
- 拟议的对比学习任务增强了节点表示协议.
结论:
- 通过解决现有的GCL方法的局限性,MICLE为DDA预测提供了有效的解决方案.
- 不同质的网络和新的对比学习任务的整合提高了预测的准确性.
- 这项工作有助于通过先进的计算方法加速药物发现.
更多相关视频
相关概念视频
Drug Biotransformation: Overview
2.2K
Pharmaceutical substances known as xenobiotics are predominantly lipophilic and nonionized. This enables them to permeate lipid bilayers, such as cell membranes, and interact with intracellular target receptors. Lipophilic drugs have an advantage in crossing biological barriers and reaching their intended sites of action. However, lipophilic drugs often have a restricted capacity for renal expulsion or elimination from the body. When these drugs enter the kidneys and undergo glomerular...
2.2K
Drug Discovery: Overview
7.2K
Drug discovery is a multifaceted process involving extensive screening, testing, and optimization of lead compounds to identify potential new drugs for therapeutic use. It combines several approaches, including screening large numbers of natural products, chemical modification of known active molecules, identification of new drug targets, and rational design based on biological mechanisms and drug-receptor structure. These approaches are carried out in both academic research laboratories and...
7.2K
Targets for Drug Action: Overview
5.9K
Drugs target macromolecules to modify ongoing cellular processes. Primary drug targets include receptors, ion channels, transporters, and enzymes.
Receptors are either membrane-spanning or intracellular proteins, which upon binding a ligand, get activated and transmit the signal downstream to elicit a response. Drugs bind receptors, either mimicking the action of endogenous ligands or blocking the receptor activity to bring about a modified response. Nearly 35% of approved drugs target the G...
Receptors are either membrane-spanning or intracellular proteins, which upon binding a ligand, get activated and transmit the signal downstream to elicit a response. Drugs bind receptors, either mimicking the action of endogenous ligands or blocking the receptor activity to bring about a modified response. Nearly 35% of approved drugs target the G...
5.9K
Bioequivalence: Overview
890
Pharmaceutical equivalents, by definition, are drug products with the same active ingredient in the same quantities, encapsulated in identical dosage forms, and intended for the same administration routes. These pharmaceutical equivalents are deemed bioequivalent if the bioavailability of the active entity in the drug preparations is similar. Moreover, pharmaceutical equivalents demonstrating bioequivalence are also regarded as therapeutically equivalent. This means that when used as directed,...
890
Structure-Activity Relationships and Drug Design
461
Drug design is a dynamic field that involves discovering and developing new medications based on specific biological targets. This process heavily relies on structure-activity relationships (SAR) and quantitative structure-activity relationships (QSAR) to guide the design and optimization of efficient drugs.
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...
SAR studies the intricate relationship between a drug's chemical structure and biological activity. It focuses on understanding how modifications to a drug's structure can influence...
461
Drug-Receptor Interactions
4.7K
Drug-receptor interaction describes the binding of receptors by drugs, but not all drug-receptor interactions result in activation and tissue response. For instance, the binding of agonists activates the receptor to generate a cellular reaction, while antagonists bind to receptors without causing their activation.
Several parameters, such as the drug's affinity for its receptor and its efficacy, which is its ability to activate the receptor, determine the drug's effect on the tissue....
Several parameters, such as the drug's affinity for its receptor and its efficacy, which is its ability to activate the receptor, determine the drug's effect on the tissue....
4.7K


