CirclizePlus:使用ggplot2功能编写可读的R代码,用于循环可视化
Zheyu Zhang1, Tianze Cao1, Yuexia Huang1
1School of Mathematics, Hangzhou Normal University, Hangzhou, China.
Frontiers in genetics
|April 11, 2025
概括
circlizePlus在R中引入了面向对象的循环可视化方法,增强了流行的circlize包. 这个新的框架提高了代码清晰度和可重复使用性,用于创建复杂的循环图.
科学领域:
- 生物信息学是一种生物信息学.
- 计算生物学 计算生物学
- 数据可视化 数据可视化
背景情况:
- ggplot2是R中矩形数据可视化的标准,因为它是面向对象的.
- 循环包广泛用于循环可视化,但采用程序编程.
- 与面向对象方法相比,程序编程可能会导致代码的清晰度和可重复使用性较差.
研究的目的:
- 推出circlizePlus,一个面向对象的包装,用于R的circlize包装.
- 为了启用ggplot2类似的语法用于循环可视化.
- 为了提高代码可读性和可重复使用性,在循环图表生成中.
主要方法:
- 将循环可视化概念重新设计成R S4类.
- 为ggplot2类似的绘图技术制定了额外的规则.
- 创建了circlizePlus作为circlize包的封装,改变了它的编程风格.
主要成果:
- circlizePlus为圆形地图提供了面向对象的编程.
- 该套件减少了编码工作,并提高了代码可读性.
- 用户可以利用熟悉的ggplot2概念进行循环数据可视化.
结论:
- circlizePlus提供了一种更直观,更有效的方法,可以在R.R.中创建圆形可视化.
- 面向对象的设计增强了循环地块的开发过程.
- 这种方法使复杂的循环图片生成更容易获得.
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