植物的进化格局 石墨烯同质酶折叠基因家族的进化格局
Kai-Yong Luo1,2, Shi-Ping Wang2,3, Ling Yang3
1College of Food Science and Technology, Yunnan Agricultural University, Kunming, Yunnan, China.
Frontiers in plant science
|April 14, 2025
概括
基因异构酶 (CHI) 基因家族在植物谱系中进化,III型可能是祖先. 基因复制驱动因素各异,塑造了CHI折叠蛋白质的多样性,并为植物进化提供了洞察力.
科学领域:
- 植物遗传学和进化生物学
- 生物化学和分子生物学.
- 生物信息学和比较基因组学
背景情况:
- 黄酸对植物的生存和适应至关重要.
- 基因异构酶 (CHI) 基因是黄类生物合成中的关键调节者.
- 了解CHI基因家族的进化对于植物适应性进化至关重要.
研究的目的:
- 系统地识别和分析CHI基因在不同植物系的演变和多样性.
- 研究CHI基因的分布模式,重复事件和结构特征.
- 为未来对CHI基因的功能研究提供基础的理解.
主要方法:
- 从259个植物物种中系统识别CHI基因,从藻类到苗.
- 对基因多样性,分布轨迹和重复驱动力的分析 (WGD,DSD,TD).
- 保存型号的识别和CHI折叠蛋白质的结构聚类.
主要成果:
- 在植物王国中确定了1738名CHI基因家族成员.
- 第二类CHI起源于植物和血管植物的祖先;第三类可能是祖先的.
- 分散重复 (DSD),全基因组重复 (WGD) 和并联重复 (TD) 是特定于谱系的驱动因素.
- 观察到保存的CHI折叠结构与N终端区域的变化.
结论:
- 这项研究阐明了植物中CHI基因的进化历史和多样化.
- 不同的重复机制在不同的植物系中塑造了CHI基因家族的进化.
- 这些发现加深了对CHI折叠蛋白质进化和结构多样性的理解.
相关概念视频
Gene Evolution - Fast or Slow?
7.0K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
7.0K
Gene Families
8.7K
Gene families consist of groups of genes proposed to have originated from a common ancestor. Typically these arise through events in which a gene or genes are mistakenly duplicated during cell division. Unlike their parent genes (which are subject to selection pressure to maintain function), these gene copies do not need to preserve their sequences and may evolve at a relatively faster rate.
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
8.7K
Comparing Mitochondrial, Chloroplast, and Prokaryotic Genomes
11.9K
The present-day mitochondrial and chloroplast genomes have retained some of the characteristics of their ancestral prokaryotes and also have acquired new attributes during their evolution within eukaryotic cells. Like prokaryotic genomes, mitochondrial and chloroplast genomes neither bind with histone-like proteins nor show complex packaging into chromosome-like structures, as observed in eukaryotes. Unlike mitotic cell divisions observed in eukaryotic cells, mitochondria and chloroplasts...
11.9K
Cis-regulatory Sequences
9.6K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
9.6K
Non-vascular Seedless Plants
63.0K
The diverse plant life on Earth—consisting of nearly 400,000 species—can be divided into three broad categories based on biological characteristics: nonvascular, seedless vascular, and seed plants.
63.0K
Gene Duplication and Divergence
6.0K
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
6.0K


