通过crRNA结构模拟进行RNA介导的CRISPR-Cas13抑制
Victoria M Hayes1, Jun-Tao Zhang2, Mark A Katz1
1Department of Microbiology, University of Washington, Seattle, WA, USA.
概括
研究人员发现了一种新的抗CRISPRRNA (rAcr),称为rAcrVIA1,它抑制了CRISPR-Cas13系统. 这种RNA使用结构模仿,而不是序列相似性来阻断细菌免疫力,扩大已知的抗CRISPR机制的多样性.
科学领域:
- 分子生物学
- 微生物遗传学
- 结构生物学
背景情况:
- 细菌菌体使用抗CRISPR (ACR) 因子来逃避CRISPR-Cas适应性免疫.
- 虽然大多数ACR是蛋白质,但RNA ACRs (rAcrs) 已经出现,模仿CRISPR RNAs (crRNAs) 抑制Cas核酶.
- 了解各种ACR机制对于利用CRISPR-Cas系统至关重要.
研究的目的:
- 发现和描述针对CRISPR-Cas系统的新型RNA抗CRISPR (rAcrs).
- 在Listeria seeligeri*中研究一种新发现的等离子体编码的rAcr的抑制机制.
- 阐明细菌中基于RNA的免疫逃避的结构基础.
主要方法:
- 来自Listeria seeligeri的塑编码小RNA,rAcrVIA1的识别和克隆.
- 生物化学测试以确认rAcrVIA1对CRISPR- Cas13系统的抑制活性.
- 用冷电子显微镜 (cryo-EM) 确定Cas13-rAcrVIA1复合物的结构.
主要成果:
- 发现了rAcrVIA1,一个阻碍RNA向CRISPR-Cas13系统的等离子体编码小RNA.
- 结构分析显示,rAcrVIA1的折叠方式与crRNA非常相似.
- 尽管对crRNA的序列同样性很小,但rAcrVIA1的抑制发生,这表明结构模拟.
结论:
- 这些发现扩大了已知RNA抗CRISPRs (rAcrs) 的范围.
- rAcrVIA1提供了一个由RNA结构模拟介导的免疫对抗的新例.
- 这一发现突显了细菌和菌体在分子军备竞赛中采用的多种策略.
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