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相关概念视频

MicroRNAs01:22

MicroRNAs

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MicroRNA (miRNA) are short, regulatory RNA transcribed from introns (non-coding regions of a gene) or intergenic regions (stretches of DNA present between genes). Several processing steps are required to form biologically active, mature miRNA. The initial transcript, called primary miRNA (pri-mRNA), base-pairs with itself, forming a stem-loop structure. Within the nucleus, an endonuclease enzyme, called Drosha, shortens the stem-loop structure into hairpin-shaped pre-miRNA. After the pre-miRNA...
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Nucleic Acid Structure01:25

Nucleic Acid Structure

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The pentose sugar in DNA is deoxyribose, while in RNA the pentose sugar is ribose. The difference between the sugars is the presence of the hydroxyl group on the ribose's second carbon and a hydrogen on the deoxyribose's second carbon. The phosphate residue attaches to the hydroxyl group of the 5′ carbon of one sugar and the hydroxyl group of the 3′ carbon of the sugar of the next nucleotide, which forms  a 5′ to 3′ phosphodiester linkage.
DNA Structure
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RNA Interference01:23

RNA Interference

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RNA interference (RNAi) is a process in which a small non-coding RNA molecule blocks the post-transcriptional expression of a gene by binding to its messenger RNA (mRNA) and preventing the protein from being translated.
This process occurs naturally in cells, often through the activity of genomically-encoded microRNAs. Researchers can take advantage of this mechanism by introducing synthetic RNAs to deactivate specific genes for research or therapeutic purposes. For example, RNAi could be used...
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RNA Editing02:23

RNA Editing

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RNA editing is a post-transcriptional modification where a precursor mRNA (pre-mRNA) nucleotide sequence is changed by base insertion, deletion, or modification. The extent of RNA editing varies from a few hundred bases, in mitochondrial DNA of trypanosomes, to a just single base, in nuclear genes of mammals. Even a single base change in the pre-mRNA can convert a codon for one amino acid into the codon for another amino acid or a stop codon. This type of re-coding can significantly affect the...
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相关实验视频

Updated: May 9, 2025

CRISPR Gene Editing Tool for MicroRNA Cluster Network Analysis
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CRISPR Gene Editing Tool for MicroRNA Cluster Network Analysis

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绘制有效的microRNA配对超越种子使用基底修改的基底修改.

David M Kosek1,2, Katja Petzold2,3,4,5, Emma R Andersson1

  • 1Department of Cell and Molecular Biology, Karolinska Institute, Biomedicum 9B, Solnavägen 9, 171 77Stockholm, Sweden.

Nucleic acids research
|April 29, 2025
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概括

微RNAs (miRNAs) 调节基因,但它们在种子区域之外如何配对尚不清楚. 这项研究使用了改性核酸来证明miRNA 3'-配对对特定的基对敏感,并有利于miRNA突起,影响基因抑制.

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A Complete Pipeline for Isolating and Sequencing MicroRNAs, and Analyzing Them Using Open Source Tools
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科学领域:

  • 分子生物学分子生物学
  • 遗传学 遗传学 是一个
  • 生物化学 生物化学

背景情况:

  • 微RNAs (miRNAs) 是基因表达的关键调节者.
  • miRNA目标识别主要涉及种子区域,但补充配对也有助于提高效率.
  • 对于有效的补充配对的结构基础仍然不完全理解.

研究的目的:

  • 为了研究miRNA补充配对的结构决定因素.
  • 阐明特定miRNA残留在目标部位选择中的作用.
  • 了解改变miRNA-3'配对对基因调节的影响.

主要方法:

  • 使用基基基基基改核酸来破坏miR-34a的残留13和14的配对.
  • 通过RNA-seq.评估修改后miR-34a对细胞转录组的影响.
  • 使用质谱学分析了蛋白质原子变化.
  • 用 luciferase 记者测定验证了验证结果.

主要成果:

  • 预测的补充配对位点的一个子集受到miRNA修改的影响.
  • mRNA水平显示,部位镇压减少了多达两倍.
  • miR-34a 3 -配对以位置依赖的方式表现出对GU波动对的敏感性.
  • 在3-配对过程中,miRNA突起比目标突起更受青.

结论:

  • 开发了一种新的方法来研究miRNA残留在标选择中的作用.
  • 证明miRNA 3配对是结构上受约束的和位置特定的.
  • 推进了对miRNA介导的基因调节机制的理解.