远距离相关的细菌共享一种严格的蛋白质组分配策略,具有灵活的酶动力学
Manlu Zhu1, Matteo Mori2, Terence Hwa2
1State Key Laboratory of Green Pesticides, Key Laboratory of Pesticide and Chemical Biology of Ministry of Education, Hubei Key Laboratory of Genetic Regulation and Integrative Biology, Department of Microbiology, School of Life Sciences, Central China Normal University, Wuhan 430079, China.
概括
细菌具有共同的蛋白质组分配蓝图,不基于生长速度,而是基于营养质量. 这种不变的程序建议在各种物种之间共享监管策略.
科学领域:
- 微生物学 微生物学
- 系统生物学 系统生物学
- 进化生物学 进化生物学
背景情况:
- 细菌蛋白质组分配策略会影响它们适应不同环境.
- 目前的知识主要来自于模型生物体*Escherichia coli*,限制了更广泛的适用性.
- 特定物种的生长速度甚至在相同的条件下也会有很大的差异.
研究的目的:
- 为了研究远距离相关的细菌物种中依赖营养素的蛋白质组分配程序.
- 为了比较超出*大肠杆菌*模型生物的蛋白质组分配策略,包括像*Vibrio natriegens*这样的快速生长物种.
- 为了识别细菌系的保存或分离的分配机制.
主要方法:
- 在各种营养条件下对蛋白质组的定量表征.
- 分析酶动力学及其特定物种的变化.
- 在不同细菌物种中对蛋白质组分配模式的比较分析.
主要成果:
- 一个不变的蛋白质组分配程序在物种中被确定,以应对不断变化的营养素.
- 该计划独立于生长速度,并依赖于营养素质量的共同内部指标.
- 快速生长的物种表现出类似于更高温度的蛋白质组分配模式,尽管有特定物种的酶动力学.
结论:
- 细菌蛋白质组分配的保存蓝图存在于各种物种中,表明共享的监管策略.
- 蛋白质组分配程序的刚性挑战了关于可进化性和资源优化的假设.
- 了解这些保存机制可以简化细菌在生态环境中的行为描述.
相关概念视频
Protein Complexes with Interchangeable Parts
2.5K
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.5K
Allosteric Proteins-ATCase
5.6K
Binding sites linkages can regulate a protein's function. For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
5.6K
Gene Evolution - Fast or Slow?
7.0K
The genomes of eukaryotes are punctuated by long stretches of sequence which do not code for proteins or RNAs. Although some of these regions do contain crucial regulatory sequences, the vast majority of this DNA serves no known function. Typically, these regions of the genome are the ones in which the fastest change, in evolutionary terms, is observed, because there is typically little to no selection pressure acting on these regions to preserve their sequences.
In contrast, regions which code...
In contrast, regions which code...
7.0K


