在猪大脑和内分泌组织中,组织特定的染色质可访问区域和转录因子结合部位
Siriluck Ponsuksili1, Frieder Hadlich2, Nares Trakooljul2
1Research Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196, Dummerstorf, Germany. ponsuksili@fbn-dummerstorf.de.
Molecular neurobiology
|June 7, 2025
概括
这项研究绘制了猪的地图.
科学领域:
- 基因组学和表观遗传学
- 神经内分泌学神经内分泌学
- 动物科学动物科学
背景情况:
- 下垂体-垂体-上腺 (HPA) 轴和边缘系统调节压力反应.
- 了解大脑和内分泌组织的表观遗传环境对于应激反应研究至关重要.
研究的目的:
- 为了生成猪大脑和内分泌组织的基础色素可访问性数据集.
- 在这些组织中识别转录因子结合基因和差异可访问区域 (DAR).
- 为遗传改进和动物福利提供对转录调节的见解.
主要方法:
- 从猪的杏仁体,海马体,丘脑,下丘脑,垂体和上腺体收集了48个组织样本.
- 应用ATAC-seq来描述可访问的染色体和绘制表观遗传景观.
- 分析了转录因子结合动机,并确定了差异可访问区域 (DAR).
主要成果:
- 确定了321,584个共识峰值,代表了开放的染色体区域.
- 在整个组织中发现了377个显著丰富的转录因子结合基因.
- 在上腺 (皮质醇合成,氨酸代谢) 和大脑区域 (细胞因子-细胞因子受体,神经活性联体受体相互作用) 发现了特定组织的功能丰富.
结论:
- 这项研究为猪大脑和内分泌组织提供了有价值的表观遗传参考图.
- 确定了参与应激反应的关键监管要素和途径.
- 为未来关于动物福利和遗传改进的研究提供了见解.
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