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相关概念视频

Translation01:31

Translation

14.7K
Translation is the process of synthesizing proteins from the genetic information carried by messenger RNA (mRNA). Following transcription, it constitutes the final step in the expression of genes. This process is carried out by ribosomes, complexes of protein and specialized RNA molecules. Ribosomes, transfer RNA (tRNA), and other proteins produce a chain of amino acids—the polypeptide—as the end product of translation.
Translation Produces the Building Blocks of Life
Proteins are...
14.7K
General Transcription Factors01:30

General Transcription Factors

5.2K
Tissue-specific transcription factors contribute to diverse cellular functions in mammals. For example, the gene for beta globin, a major component of hemoglobin, is present in all cells of the body. However, it is only expressed in red blood cells because the transcription factors that can bind to the promoter sequences of the beta globin gene are only expressed in these cells. Tissue-specific transcription factors also ensure that mutations in these factors may impair only the function of...
5.2K
Leaky Scanning02:28

Leaky Scanning

5.1K
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA.  Marilyn Kozak discovered that the sequence RCCAUGG (where R...
5.1K
Mouse Models of Cancer Study02:43

Mouse Models of Cancer Study

5.5K
Mice have long served as models for studying human biology and pathology because of their phylogenetic and physiological similarity with humans. They are also easy to maintain and breed in the laboratory, and hence, many inbred strains are now available for research. Studies on mice have contributed immeasurably to our understanding of cancer biology.
The development of transgenic, knockout, and knock-in mice has led to an exponential increase in their use as model organisms in research,...
5.5K
Cis-regulatory Sequences02:02

Cis-regulatory Sequences

9.8K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
9.8K
In-vitro Mutagenesis01:16

In-vitro Mutagenesis

13.9K
To learn more about the function of a gene, researchers can observe what happens when the gene is inactivated or “knocked out,” by creating genetically engineered knockout animals. Knockout mice have been particularly useful as models for human diseases such as cancer, Parkinson’s disease, and diabetes.
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相关实验视频

Updated: Jun 13, 2025

Dissection of the Auditory Bulla in Postnatal Mice: Isolation of the Middle Ear Bones and Histological Analysis
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Dissection of the Auditory Bulla in Postnatal Mice: Isolation of the Middle Ear Bones and Histological Analysis

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在小鼠胚胎发生和组织特异性发育性疾病期间发现子使用模式.

Sarah E Fumagalli1, Sean Smith2, Brian Lin1

  • 1Hemostasis Branch, Division of Plasma Protein Therapeutics, Office of Tissues and Advanced Therapies, Center for Biologics Evaluation and Research (CBER), Food and Drug Administration (FDA), Silver Spring, MD, United States.

Frontiers in genetics
|June 10, 2025
PubMed
概括

分析小鼠胚胎发育揭示了组织特异性基因中的密码子使用模式如何影响发育障碍. 这项研究提供了对基因调节和疾病机制的见解.

关键词:
聚类方法 聚类方法与疾病相关的比较.机器学习是机器学习.鼠标胚胎学 鼠标胚胎学相对同义词 codon 使用情况组织特异性的组织特异性的组织特异性转录组加权的转录组加权.

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Chromatin Immunoprecipitation Assay for Tissue-specific Genes using Early-stage Mouse Embryos
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Chromatin Immunoprecipitation Assay for Tissue-specific Genes using Early-stage Mouse Embryos

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Removal of an Internal Translational Start Site from mRNA While Retaining Expression of the Full-Length Protein
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Removal of an Internal Translational Start Site from mRNA While Retaining Expression of the Full-Length Protein

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相关实验视频

Last Updated: Jun 13, 2025

Dissection of the Auditory Bulla in Postnatal Mice: Isolation of the Middle Ear Bones and Histological Analysis
07:40

Dissection of the Auditory Bulla in Postnatal Mice: Isolation of the Middle Ear Bones and Histological Analysis

Published on: January 4, 2017

30.1K
Chromatin Immunoprecipitation Assay for Tissue-specific Genes using Early-stage Mouse Embryos
11:02

Chromatin Immunoprecipitation Assay for Tissue-specific Genes using Early-stage Mouse Embryos

Published on: April 29, 2011

18.1K
Removal of an Internal Translational Start Site from mRNA While Retaining Expression of the Full-Length Protein
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Removal of an Internal Translational Start Site from mRNA While Retaining Expression of the Full-Length Protein

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科学领域:

  • 发展生物学 发展生物学
  • 基因组学就是基因组学.
  • 生物信息学是一种生物信息学.

背景情况:

  • 由于共同的遗传相似性,小鼠模型对于理解人类遗传疾病至关重要.
  • 胚胎组织特异性基因在疾病发育中起着重要作用.
  • 分析时间转录数据可以揭示对基因功能和疾病的见解.

研究的目的:

  • 为了分析小鼠胚胎组织中的代使用模式.
  • 确定编码子使用中的偏差与发育障碍的关系.
  • 为未来对胚胎疾病过程的研究提供资源.

主要方法:

  • 在胚胎发育过程中,对四种老鼠菌株的肝脏,心脏和眼睛组织的转录组加权数据进行分析.
  • 计算相对同义符号使用率 (RSCU).
  • 应用缩小维度和机器学习集群技术.

主要成果:

  • 在老鼠菌株中识别编码子使用差异和相似之处.
  • 检测健康和与疾病相关的基因之间的代码使用模式的偏差.
  • 建立鼠标胚胎CoCoPUTs网站作为一个数据资源.

结论:

  • 对于理解胚胎发育和相关疾病而言,Codon的使用模式至关重要.
  • 编码子使用的偏差可以作为发育障碍的生物标志物.
  • 鼠标胚胎CoCoPUTs资源有助于进一步研究基因调节和疾病机制.