相关实验视频
Updated: Jun 13, 2025

06:59
Nanomanipulation of Single RNA Molecules by Optical Tweezers
Published on: August 20, 2014
14.8K
协同转录的折叠通过糖氨酸联 рибо开关编排了顺序的多效应器传感
bioRxiv : the preprint server for biology
|June 12, 2025
概括
甘氨酸联 рибо开关 (GTR) 使用序列甘氨酸结合和RNA折叠,以聚合酶暂停为指导,以控制转录期间的基因表达. 这个过程涉及复杂的分子相互作用和非平衡机制,用于糖氨酸结合合作性.
科学领域:
- 分子生物学分子生物学
- 在RNA生物学,RNA生物学.
- 生物化学 生物化学
背景情况:
- 带状切换器是对小分子做出反应的非编码RNA调节元件.
- 甘氨酸联 рибо开关 (GTR) 具有两个甘氨酸体,具有广泛的体间接触.
- 同转录调节机制和甘氨酸在GTR功能中的作用仍然不完全理解.
研究的目的:
- 阐明同转录折叠路径和甘氨酸联 рибо开关 (GTR) 的调节机制.
- 研究如何处理序列分子输入来控制转录期间的基因表达.
主要方法:
- 单分子运动分析
- 共同转录的RNA结构探测
- 计算建模计算建模
- 转录因子NusA调节研究研究.
主要成果:
- GTR遵循一个逐步的5'-至-3'-折叠路径,受聚合酶暂停的影响.
- 甘氨酸对每个阿普坦酶的顺序结合,K+对一个扭转,以及与非原生RNA中间体的相互作用至关重要.
- 互体对接和NusaA调节了这个过程,导致结合部位的预组织.
- 甘氨酸结合合作性通过非平衡机制运作,而不是经典的协调模式.
结论:
- 在共同转录调节期间,GTR连续集成多个分子信号.
- RNA折叠路径和连接体结合动态与基因表达控制密切相关.
- 非平衡机制驱动在杆开关连接体结合中的合作性.
相关概念视频
Riboswitches
8.1K
Riboswitches are non-coding mRNA domains that regulate the transcription and translation of downstream genes without the help of proteins. Riboswitches bind directly to a metabolite and can form unique stem-loop or hairpin structures in response to the amount of the metabolite present. They have two distinct regions – a metabolite-binding aptamer and an expression platform.
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
The aptamer has high specificity for a particular metabolite which allows riboswitches to specifically regulate...
8.1K
Protein Folding Quality Check in the RER
3.7K
ER is the primary site for the maturation and folding of soluble and transmembrane secretory proteins. The calnexin cycle is a specific chaperone system that folds and assesses the confirmation of N-glycosylated proteins before they can exit the ER lumen. The primary players of this quality check pipeline are the lectins, ER-resident chaperones, and a glucosyl transferase enzyme. In case the calnexin system in the lumen fails to salvage a misfolded protein, it is transported to the cytoplasm...
3.7K
RNA Structure
4.7K
The basic structure of RNA consists of a string of ribonucleotides attached by phosphodiester bonds. Although most RNA is single-stranded, it can form complex secondary and tertiary structures. Such structures play essential roles in the regulation of transcription and translation.
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA) involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three...
Different Types of RNA Have the Same Basic Structure
There are three main types of ribonucleic acid (RNA) involved in protein synthesis: messenger RNA (mRNA), transfer RNA (tRNA), and ribosomal RNA (rRNA). All three...
4.7K
Termination of Translation
25.3K
The large ribosomal subunit has several important structures essential to translation. These include the peptidyl transferase center (PTC) - which is the site where the peptide bond is formed - and a large, internal, water-filled tube through which the nascent polypeptide moves. This latter structure is called the Peptide Exit Tunnel, and it begins at the PTC and spans the body of the large ribosomal subunit. During translation, as the nascent polypeptide chain is synthesized, it passes through...
25.3K
Improving Translational Accuracy
9.4K
Base complementarity between the three base pairs of mRNA codon and the tRNA anticodon is not a failsafe mechanism. Inaccuracies can range from a single mismatch to no correct base pairing at all. The free energy difference between the correct and nearly correct base pairs can be as small as 3 kcal/ mol. With complementarity being the only proofreading step, the estimated error frequency would be one wrong amino acid in every 100 amino acids incorporated. However, error frequencies observed in...
9.4K
Leaky Scanning
5.1K
During most eukaryotic translation processes, the small 40S ribosome subunit scans an mRNA from its 5' end until it encounters the first start AUG codon. The large 60S ribosomal subunit then joins the smaller one to initiate protein synthesis. The location of the translation initiation is largely determined by the nucleotides near the start codon as there may be multiple translation initiation sites present on the mRNA. Marilyn Kozak discovered that the sequence RCCAUGG (where R...
5.1K

