Jove
Visualize
联系我们
JoVE
x logofacebook logolinkedin logoyoutube logo
关于 JoVE
概览领导团队博客JoVE 帮助中心
作者
出版流程编辑委员会范围与政策同行评审常见问题投稿
图书馆员
用户评价订阅访问资源图书馆顾问委员会常见问题
研究
JoVE JournalMethods CollectionsJoVE Encyclopedia of Experiments存档
教育
JoVE CoreJoVE BusinessJoVE Science EducationJoVE Lab Manual教师资源中心教师网站
使用条款与条件
隐私政策
政策

相关概念视频

Cytoskeletal Proteins in Bacteria01:29

Cytoskeletal Proteins in Bacteria

3.3K
Bacterial cells were initially considered simple, randomly organized structures lacking a cytoskeleton. However, the discovery of cytoskeleton homologs in bacteria led to the change of this opinion. Bacterial cytoskeletal filaments regulate the cell shape, cell polarity, cell division, and partitioning of plasmids during cell division. It was later discovered that bacterial cytoskeletal proteins, mainly actin and tubulin homologs, are diverse compared to their eukaryotic counterparts. On the...
3.3K
Allosteric Proteins-ATCase01:19

Allosteric Proteins-ATCase

5.7K
Binding sites linkages can regulate a protein's function.  For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to  N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
5.7K
Microtubule Instability02:17

Microtubule Instability

5.0K
Microtubules are hollow cylindrical filaments having a diameter of approximately 25 nm and a length that varies from 200 nm to 25 μm. GTP-bound tubulin subunits form αβ-heterodimers for microtubule assembly. These core building blocks interact longitudinally, polymerizing into protofilaments. The protofilaments then interact with one another through lateral bonding forces to form stable cylindrical microtubules. These cylindrical filaments are dynamic as they undergo repeated...
5.0K
Protein Complex Assembly02:41

Protein Complex Assembly

10.6K
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types.  Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
10.6K
Introduction to Actin01:26

Introduction to Actin

5.0K
Actin is a highly conserved cytoskeletal protein found abundantly in eukaryotic cells. It constitutes 10% weight of the total cellular protein in muscle cells, while in non-muscle cells, it is lower and makes up around 1–5 percent of the total cell protein. Actin found in the unicellular amoebae and complex multicellular animals is around 80% similar, demonstrating their conservation over a billion years of evolution.  Actin coding genes are conserved within species and across...
5.0K
Ligand Binding and Linkage00:49

Ligand Binding and Linkage

4.8K
Allosteric proteins have more than one ligand binding site; the binding of a ligand to any of these sites influences the binding of ligands to the other sites. When a protein is allosteric, its binding sites are called coupled or linked.  In the case of enzymes, the site that binds to the substrate is known as the active site and the other site is known as the regulatory site. When a ligand binds to the regulatory site, this leads to conformational changes in the protein that can influence...
4.8K

您也可能阅读

相关文章

通过共同作者、期刊和引用图与本文相关的文章。

排序
Same author

Computer Simulation Modeling for Recreation Management: A Study on Carriage Road Use in Acadia National Park, Maine, USA.

Environmental management·1999
Same author

An Analysis of Higher Order Vibration-Torsion-Rotation Interactions and Spectra for a Molecule with an Internal Rotor.

Journal of molecular spectroscopy·1999
Same author

Preparation of Palladium Ultrafine Particles in Reverse Micelles.

Journal of colloid and interface science·1999
Same author

Prediction of photosynthetic production rate of ethylene using a recombinant cyanobacterium

Journal of theoretical biology·1999
Same author

Conformational Structure of Triblock Copolymers by FT-Raman and FTIR Spectroscopy.

Journal of colloid and interface science·1999
Same author

Surface Characters and Adsorption Behavior of Pb(II) onto a Mesoporous Titanosilicate Molecular Sieve.

Journal of colloid and interface science·1999

相关实验视频

Updated: Jun 14, 2025

A Toolkit to Enable Hydrocarbon Conversion in Aqueous Environments
20:28

A Toolkit to Enable Hydrocarbon Conversion in Aqueous Environments

Published on: October 2, 2012

14.1K

活动和稳定性改善:从细菌细菌中对CotA的结构功能洞察力.

Wei He1, Yiru1, Wang1

  • 1Beijing Key Laboratory of Bioactive Substances and Functional Foods, College of Biochemical Engineering, Beijing Union University, Beijing 100023, China.

International journal of biological macromolecules
|June 12, 2025
PubMed
概括

研究人员设计了一种细菌多铜氧化酶 (CotA) 变体,其活性高6倍,热稳定性更好. 分子动力学模拟显示了与增强的酶功能和工业应用的稳定性相关的结构变化.

关键词:
催化效率 催化效率 催化效率科塔A 科塔A 是一个模拟MD的模拟方法局部导向的突变发生.热稳定性 热稳定性

更多相关视频

Monitoring Intraspecies Competition in a Bacterial Cell Population by Cocultivation of Fluorescently Labelled Strains
06:45

Monitoring Intraspecies Competition in a Bacterial Cell Population by Cocultivation of Fluorescently Labelled Strains

Published on: January 18, 2014

8.5K
Using Coculture to Detect Chemically Mediated Interspecies Interactions
08:29

Using Coculture to Detect Chemically Mediated Interspecies Interactions

Published on: October 31, 2013

13.6K

相关实验视频

Last Updated: Jun 14, 2025

A Toolkit to Enable Hydrocarbon Conversion in Aqueous Environments
20:28

A Toolkit to Enable Hydrocarbon Conversion in Aqueous Environments

Published on: October 2, 2012

14.1K
Monitoring Intraspecies Competition in a Bacterial Cell Population by Cocultivation of Fluorescently Labelled Strains
06:45

Monitoring Intraspecies Competition in a Bacterial Cell Population by Cocultivation of Fluorescently Labelled Strains

Published on: January 18, 2014

8.5K
Using Coculture to Detect Chemically Mediated Interspecies Interactions
08:29

Using Coculture to Detect Chemically Mediated Interspecies Interactions

Published on: October 31, 2013

13.6K

科学领域:

  • 生物化学 生物化学
  • 结构生物学 结构生物学
  • 酶工程是什么? 酶工程是什么?

背景情况:

  • 细菌多铜氧化酶 (CotA) 是一种多功能酶,具有工业生物催化和环境修复的潜力.
  • 现有的增强CotA特性方法包括定向进化和蛋白质设计,但结构洞察力仍然有限.

研究的目的:

  • 调查CotA突变体中增强活性和稳定的结构基础.
  • 为了确定特定的突变,以提高CotA在工业应用中的性能.

主要方法:

  • 局部定向突变发生被用来从Bacillus subtilis产生CotA单个和双重突变.
  • 用分子动力学 (MD) 模拟来分析突变者的结构特征.
  • 通过实验评估了酶活性和热稳定性.

主要成果:

  • 在T377I/T418G CotA变种中,ABTS特异性活性增加了6.12倍,在80°C时热稳定性提高了50%.
  • MD模拟表明,增加的活性与扩大的酶结合口袋相关.
  • 增强的热稳定性与酶的二次结构中更高比例的随机线圈有关.

结论:

  • 特定的突变可以显著提高CotA的催化活性和热稳定性.
  • 通过MD模拟进行结构分析,可以深入了解酶改进的基础机制.
  • 这项研究为优化CotA用于各种工业和环境应用提供了基础.