野生私生的基因组序列,Ligustrum vulgare L
Zoë A Goodwin1, David Bell1, Vladimir Krivtsov1
1Royal Botanic Garden Edinburgh, Edinburgh, Scotland, UK.
Wellcome open research
|June 18, 2025
概括
我们对野生 (Ligustrum vulgare) 的基因组进行了测序,这是一种属于Oleaceae家族的植物. 这为了解植物遗传学和进化提供了基础资源.
科学领域:
- 基因组学就是基因组学.
- 植物生物学 植物生物学
- 分子进化分子进化
背景情况:
- 常见的Ligustrum vulgare,通常被称为野生私生,是Oleaceae家族中的一个重要物种.
- 了解野生的遗传构成对于进化研究和潜在的农业应用至关重要.
研究的目的:
- 为了生成Ligustrum vulgare.的高质量基因组组合.
- 为Oleaceae家族提供一个全面的基因组资源.
主要方法:
- 在Ligustrum vulgare.的全基因组测序.
- 基因组组装成染色体伪分子的架构.
- 使用Ensembl.使用蛋白质编码基因的注释.
主要成果:
- 一个由1384.00兆基的基因组组件被生成.
- 该组件被组织成23个染色体伪分子.
- 描述了多部分线粒体基因组和塑基因组,并确定了31,482个蛋白质编码基因.
结论:
- 提出的基因组组合代表了对Ligustrum vulgare.的基因组资源的重大进展.
- 这些基因组数据将促进未来对植物遗传学,进化和Oleaceae家族中的繁殖的研究.
相关概念视频
Evolutionary Relationships through Genome Comparisons
6.2K
Genome comparison is one of the excellent ways to interpret the evolutionary relationships between organisms. The basic principle of genome comparison is that if two species share a common feature, it is likely encoded by the DNA sequence conserved between both species. The advent of genome sequencing technologies in the late 20th century enabled scientists to understand the concept of conservation of domains between species and helped them to deduce evolutionary relationships across diverse...
6.2K
Multi-species Conserved Sequences
4.3K
Next-generation sequencing technologies have created large genomic databases of a variety of animals and plants. Ever since the human genome project was completed, scientists studied the genome of primates, mammals, and other phylogenetically distant living beings. Such large-scale studies have provided new insights into the evolutionary relationship between organisms.
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...
Although the genome of each species varies greatly from each other, a few sequences are highly conserved. Such conserved...
4.3K
LTR Retrotransposons
18.0K
LTR retrotransposons are class I transposable elements with long terminal repeats flanking an internal coding region. These elements are less abundant in mammals compared to other class I transposable elements. About 8 percent of human genomic DNA comprises LTR retrotransposons. Some of the common examples of LTR retrotransposons are Ty elements in yeast and Copia elements in Drosophila.
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
18.0K
Cis-regulatory Sequences
10.2K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
10.2K
Genomic DNA in Eukaryotes
47.8K
Eukaryotes have large genomes compared to prokaryotes. To fit their genomes into a cell, eukaryotic DNA is packaged extraordinarily tightly inside the nucleus. To achieve this, DNA is tightly wound around proteins called histones, which are packaged into nucleosomes that are joined by linker DNA and coil into chromatin fibers. Additional fibrous proteins further compact the chromatin, which is recognizable as chromosomes during certain phases of cell division.
47.8K
Ligand Binding Sites
7.9K
7.9K


