纵向测序揭示了基因组对选择的反应的多基因和表观性质
Simon K G Forsberg1,2, Diogo Melo1,2, Scott W Wolf1,2
1Lewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544.
概括
进化适应涉及复杂的遗传变化. 这项研究揭示了多基因适应,由许多小的遗传变化和表观症驱动,在适应高糖饮食的果中很常见.
科学领域:
- 进化遗传学的进化遗传学
- 人口遗传学 人口遗传学
- 基因组学就是基因组学.
背景情况:
- 进化适应新环境是由遗传变化驱动的.
- 虽然选择性扫描得到了很好的研究,但多基因适应更常见,但难以量化.
- 无限小的模型提供了一个框架,用于理解选择下的等位基频率动态.
研究的目的:
- 为了研究Drosophila melanogaster*对高糖饮食适应的遗传基础.
- 量化多基因反应并识别选择的特征.
- 探索表观症在适应中的作用.
主要方法:
- 一个Evolve & Resequence实验是在100代以上的Drosophila melanogaster上进行的.
- 在>3000个单个和种群池中跟踪了等位基因频率的变化.
- 鉴定了选择和表观相互作用的特征,并分析了差异表达基因 (DEGs).
主要成果:
- 至少4%的基因组显示出积极选择的迹象,表明高度多基因的反应.
- 适应主要是由小,一致的等位基因频率变化,很少有大的变化.
- 检测到未连接的位置之间表皮性相互作用的强烈信号,并为选定的SNP增强了DEGs.
结论:
- 多基因适应是进化反应的一个重要模式.
- 表观相互作用是常见的,在多基因适应中起着至关重要的作用.
- 选择的遗传变异与基因表达的变化有关.
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