在病毒组合中,模糊的核糖核蛋白复合体的演变
Huaying Zhao1, Tiansheng Li2, Sergio A Hassan3
1Laboratory of Dynamics of Macromolecular Assembly, National Institute of Biomedical Imaging and Bioengineering, National Institutes of Health, Bethesda, MD 20892, USA.
bioRxiv : the preprint server for biology
|June 26, 2025
概括
在SARS-CoV-2核体 (N) 蛋白中的突变增强了核蛋白 (RNP) 组合,提高了病毒适应性. 融合进化加强了N蛋白界面,有助于病毒适应和宿主进化.
科学领域:
- 病毒学 病毒学
- 结构生物学 结构生物学
- 分子生物学分子生物学
背景情况:
- 在SARS-CoV-2组装过程中,核体 (N) 蛋白质将病毒RNA凝聚成核蛋白颗粒 (RNP).
- 之前的生物化学和生物物理研究阐明了RNP的架构原理,突出了N蛋白质寡合化启动的合作性蛋白质-蛋白质和蛋白质-RNA相互作用.
研究的目的:
- 调查SARS-CoV-2变种中核体 (N) 蛋白突变对RNP形成的影响.
- 了解这些突变如何影响病毒健康和宿主适应.
主要方法:
- 利用生物物理工具来分析RNP的形成.
- 使用类似病毒的粒子测试来评估RNP组件.
- 进行了逆遗传学实验,以评估N蛋白突变的功能后果.
主要成果:
- 观察到融合进化,独立突变加强现有的N蛋白结合接口.
- 确定了Omicron变异中的N:P13L突变产生了一个新的自我关联接口,增强了RNP组装.
- 证明与这些突变相关的病毒适应性增加.
结论:
- 在SARS-CoV-2变种中的N蛋白突变通过加强或新型接口来增强RNP组装和病毒适应性.
- 假设多分散,模糊的N-RNA集群与分布式的弱结合接口优化可逆RNA凝聚.
- 这种机制支持病毒适应和进化,允许探索一个大的序列空间.
相关概念视频
Protein Complex Assembly
11.1K
Proteins can form homomeric complexes with another unit of the same protein or heteromeric complexes with different types. Most protein complexes self-assemble spontaneously via ordered pathways, while some proteins need assembly factors that guide their proper assembly. Despite the crowded intracellular environment, proteins usually interact with their correct partners and form functional complexes.
Many viruses self-assemble into a fully functional unit using the infected host cell to...
Many viruses self-assemble into a fully functional unit using the infected host cell to...
11.1K
Protein Complexes with Interchangeable Parts
2.6K
Groups of proteins may form a complex where each protein in this complex has a different role in the overall execution of the complex’s function. Often some of the proteins in the complex can be replaced by a closely related variant to give a complex that contains many of the same components yet is functionally distinct.
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
The SCF ubiquitin ligase is a protein complex of five individual proteins. This complex attaches ubiquitin to other target proteins to mark them for degradation. In order...
2.6K
Retrovirus Life Cycles
47.0K
Retroviruses have a single-stranded RNA genome that undergoes a special form of replication. Once the retrovirus has entered the host cell, an enzyme called reverse transcriptase synthesizes double-stranded DNA from the retroviral RNA genome. This DNA copy of the genome is then integrated into the host’s genome inside the nucleus via an enzyme called integrase. Consequently, the retroviral genome is transcribed into RNA whenever the host’s genome is transcribed, allowing the...
47.0K
Size and Structure of Viral Genomes
170
Viral genomes exhibit remarkable diversity in size, structure, and composition, influencing their replication strategies and interactions with host cells. These genomes consist of either DNA or RNA and may be linear or circular. Additionally, they can be single-stranded or double-stranded, with each configuration affecting how the virus propagates within a host. RNA viruses, for instance, generally have smaller genomes than DNA viruses, a factor that contributes to their high mutation rates and...
170
RNA Polymerase II Accessory Proteins
9.6K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.6K
Retroviruses
12.7K
Retroviruses and retrotransposons both insert copies of their genetic elements into the genome of the host cell. Thus, the viral genes are passed on when the host genome is replicated or translated. A typical retroviral DNA sequence contains 3-4 genes that encode the different proteins required for its structural assembly and function as a molecular parasite. This DNA is transcribed into a single mRNA, which is very similar in structure to conventional mRNAs, i.e., it is capped at the 5’...
12.7K


