氧化和水解HNO形成从临床药物Hydroxyurea催化胡卜过氧化酶:基本机制,活性部位效应,以及对药物设计的影响
Erika McCarthy1, Dariya Baizhigitova1, Jia-Min Chu1
1Department of Chemistry and Chemical Biology, Stevens Institute of Technology, 1 Castle Point Terrace, Hoboken, New Jersey 07030, United States.
这项研究详细介绍了红过氧化酶 (HRP) 如何从氧尿素中产生氧化 (HNO). 计算分析揭示了一种涉及质子合电子转移的新型机制,有助于未来的药物设计.
科学领域:
- 生物化学 生物化学
- 计算化学的计算化学
- 酶学 是一种酶学.
背景情况:
- 氧化 (HNO) 对血管扩张和神经功能等生物过程至关重要.
- 对于HNO生成的酶途径尚不清楚.
- 氧尿素是一种临床使用的药物,具有潜在的HNO释放特性.
研究的目的:
- 为了研究HNO形成的机制,从氧尿素催化草过氧化酶 (HRP).
- 提供酶反应途径的详细计算分析.
- 确定与HNO产生相关的未来药物开发的结构特征.
主要方法:
- 用密度函数理论 (DFT) 的计算来建模反应机制.
- 分析从氧尿素到HRP化合物I的质子合电子转移 (PCET).
- 在HRP.内调查活性位点的形状变化和结网络.
主要成果:
- 确定了一种有利的机制,涉及从氧尿素到HRP化合物I的两个连续的PCET,用于生成HNO.
- 计算结果与实验观察到的反应性一致.
- 观察到HRP活性部位的形状变化,通过CONH2部分促进基质定.
- 这项研究为产生HNO的酸酸盐解机制提供了第一个计算洞察力.
结论:
- 这项研究阐明了由氧尿素生成酶性氧化和水解性HNO的详细计算机制.
- 这些发现揭示了有利于设计未来调节HNO水平的药物的结构性质.
- 这项研究支持了实验观察到的酸酸盐解液的HNO生产的容易反应性.
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