细胞形电子系统设计的亡途径与外部和内在的干扰
Trisha Patra1, Sanjit Dey2, Soma Barman Mandal1
1Institute of Radio Physics and Electronics, University of Calcutta, 92, APC Road, Kolkata, 700009, West Bengal, India.
Computational biology and chemistry
|June 27, 2025
概括
本研究介绍了一种新的生物启发的芯片系统 (SoC) 设计,用于使用金属氧化物半导体 (MOS) 电子产品建模亡网络. 生物电子方法为药物试验模拟提供了一个更快,更无残酷的替代方案.
科学领域:
- 生物技术是生物技术.
- 电子工程 电子工程
- 计算生物学 计算生物学
背景情况:
- 生物启发的系统芯片 (SoC) 设计将生物过程与电子电路相结合.
- 这些SoC通过捕捉生物通路动态,为药物试验提供经济,快速和无残忍的替代方案.
研究的目的:
- 开发一个可扩展的,生物灵感的基于金属氧化物半导体 (MOS) 的SoC用于随机亡网络.
- 用非线性普通微分方程建模细胞灭中的蛋白质动态,并将其转化为电子电路.
主要方法:
- 亡蛋白的数学模型是使用非线性普通微分方程开发的.
- 生物系统被转换成一个相当的电子电路,使用基于MOSFET的双阶段微分放大器.
- 模拟与细胞培养数据相对验证,使用皮尔森相关性和COPASI 4.25.25.
主要成果:
- 模拟的蛋白质度准确地复制了亡动态和分子间相互作用.
- 在模拟和细胞培养数据之间观察到强烈的正相关性.
- 该细胞形系统在连续和离散时间域中都表现出稳定性.
结论:
- 开发的基于MOS的SoC提供了一个可行的和可靠的平台来模拟亡网络.
- 这种生物电子方法通过提供更有效和更道德的替代方案来推进药物试验方法.
- 该研究验证了将生物原理与电子设计集成为复杂途径建模的潜力.
相关概念视频
The Extrinsic Apoptotic Pathway
6.6K
The extrinsic apoptotic pathway is initiated when extracellular death-inducing signals, such as specific cytokines, activate the death receptors expressed on the cell surface. The immune cells involved in this pathway are natural killer cells (NK cells) and cytotoxic T-lymphocytes. NK cells are critical in innate immune response, while cytotoxic T-lymphocytes are associated with adaptive immune response. These cells recognize specific receptors expressed on the altered cells and activate...
6.6K
The Intrinsic Apoptotic Pathway
6.9K
Internal cellular stress, such as cellular injury or hypoxia, triggers intrinsic apoptosis. The B-cell lymphoma 2 (Bcl-2) family of proteins are the primary regulators of the intrinsic apoptotic pathway. For example, during DNA damage, checkpoint proteins, such as Ataxia Telangiectasia Mutated (ATM protein) and Checkpoints Factor-2 (Chk2) proteins, are activated. These proteins phosphorylate p53 which further activates pro-apoptotic proteins, such as Bax, Bak, PUMA, and Noxa, and inhibits...
6.9K
Apoptosis
12.0K
Apoptosis is a combination of two Greek words, 'apo' and 'ptosis,' meaning separation and falling off, respectively. Hippocrates used this word to describe gangrene, which was caused due to bandaging of fractured bones. Apoptosis was distinguished from necrosis in 1970 when John Kerr reported observations of morphological changes occurring during apoptosis. During one experiment, he observed that the disruption of blood supply to the liver tissue resulted in a size...
12.0K
Caspases
12.7K
Caspase, a family of cysteine proteases, serve as effectors in apoptosis. The ced3 gene in C.elegans was first identified to be involved in apoptosis. This gene encodes the ced-3 caspase that is similar to the interleukin-1-beta converting enzyme or ICE in mammals. In addition to apoptosis, caspases also function in the inflammatory response. Inflammatory caspases are essential in activating pro-inflammatory cytokines that recruit immune cells and block the replication of pathogens inside...
12.7K
Overview of Cell Death
7.8K
Cell death is an essential process where the body gets rid of old or damaged cells. Cell proliferation and death need to be balanced, as an imbalance between the two may lead to cancer or autoimmune diseases.
Cell death was observed in the early 19th century, but there was no experimental evidence to prove it. In 1842, Carl Vogt first discovered cell death in a metamorphic toad; however, it was not termed ‘cell death.’ Scientists discovered different cell death pathways only in the...
Cell death was observed in the early 19th century, but there was no experimental evidence to prove it. In 1842, Carl Vogt first discovered cell death in a metamorphic toad; however, it was not termed ‘cell death.’ Scientists discovered different cell death pathways only in the...
7.8K
Autophagic Cell Death
3.6K
Christian de Duve discovered “autophagy,” a process in which cellular components are engulfed by membrane-bound organelles called autophagosomes. The autophagosomes then fuse with lysosomes to digest the enclosed contents. Autophagy is generally activated in cells to prevent cell death. However, cell death is triggered when the damage is beyond repair.
Autophagy and Apoptosis
Autophagy can activate apoptosis. In normal conditions, the autophagy activating protein Beclin-1 and...
Autophagy and Apoptosis
Autophagy can activate apoptosis. In normal conditions, the autophagy activating protein Beclin-1 and...
3.6K


