一种基于频率向量生成化学异构体的动态编程算法
Ryota Ido1, Naveed Ahmed Azam2,3, Jianshen Zhu1
1Department of Applied Mathematics and Physics, Kyoto University, Yoshida Honmachi, Sakyo, 606-8501, Kyoto, Japan.
Scientific reports
|July 2, 2025
概括
我们开发了一个动态编程算法,使用图形理论生成化学异构体. 这种方法有效地计算和列举异构体,加速了用于药物发现和材料科学的新型分子结构的发现.
科学领域:
- 计算化学计算化学
- 图形理论 图形理论
- 化学信息学 化学信息学
背景情况:
- 生成化学异构体对于探索分子多样性至关重要.
- 对于复杂的分子,现有的方法可能是计算密集的.
研究的目的:
- 开发一种高效的算法,用于生成和计算化学同位素.
- 为了创建一个对同位素计数的紧表示.
主要方法:
- 以特征向量的图形表示化学化合物.
- 使用图形理论描述符,特别是"边缘配置".
- 应用动态编程来生成异构体.
主要成果:
- 给定图表中的所有化学同位素的紧表示.
- 在没有明确生成的情况下有效计数异构体.
- 编号任意数量的同位体的能力,包括随机编号.
结论:
- 该算法加速了药物发现和材料科学中的化学化合物探索.
- 增强搜索空间探索新型分子结构的搜索.
- 通过高效的同位素计数,促进了分子设计的进步.
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