一个转录的Pol II-DSIF-SPT6-U1 snRNP复合物的结构
Luojia Zhang1, Christopher Batters1, Shintaro Aibara2
1MRC Laboratory of Molecular Biology, Cambridge, UK.
Nature communications
|July 2, 2025
概括
在真核细胞中,协同转录的拼接受RNA聚合酶II (Pol II) 和U1小核核核糖核蛋白粒子 (U1 snRNP) 的调节. 我们揭示了促进这一关键基因表达过程的结构和相互作用.
科学领域:
- 分子生物学分子生物学
- 基因表达规范 基因表达规范
- 结构生物学 结构生物学
背景情况:
- 化在真核细胞中主要发生在共同转录上.
- 这一过程提高了拼接效率和保真度.
- RNA聚合酶II (Pol II) 将U1小核核核糖核蛋白粒子 (U1 snRNP) 招募到新生的转录中,用于共同转录的拼接.
研究的目的:
- 确定U1 snRNP招募到转录延长复合体的结构基础.
- 阐明延长因子DSIF和SPT6在这个过程中的作用.
- 了解这些相互作用如何调节基因表达.
主要方法:
- 低温电子显微镜 (cryo-EM) 用于确定转录Pol II-U1 snRNP复合物的结构.
- 生物化学分析用于研究蛋白质与蛋白质相互作用.
主要成果:
- 确定了转录Pol II-U1 snRNP复合体与DSIF和SPT6的冷-EM结构.
- 酸化的Pol II C端子域和SPT6直接与U1 snRNP蛋白相互作用.
- 这种相互作用促进了U1 snRNP在延长复合体中的招募.
结论:
- U1 snRNP与转录延长复合体之间的多价值相互作用对于共转录拼接至关重要.
- 这些相互作用可能会确保高效的结合体组合和转录过程性.
- 这为基因表达的调节提供了机械的洞察力.
相关概念视频
RNA Splicing
57.1K
Splicing is the process by which eukaryotic RNA is edited before its translation into protein. The RNA strand transcribed from eukaryotic DNA is called the primary transcript. The primary transcripts that become mRNAs are called precursor messenger RNAs (pre-mRNAs). Eukaryotic pre-mRNA contains alternating sequences of exons and introns. Exons are nucleotide sequences that code for proteins, whereas introns are the non-coding regions. In RNA splicing, introns are removed and exons are bonded...
57.1K
Transcription Initiation
16.8K
Initiation is the first step of transcription in eukaryotes. Prokaryotic RNA Polymerase (RNAP) can bind to the template DNA and start transcribing. On the other hand, transcription in eukaryotes requires additional proteins, called transcription factors, to first bind to the promoter region in the DNA template. This binding helps recruit the specific RNAP that can assemble on the DNA and start transcription.
The promoters and enhancers and their accessory proteins allow tight regulation of...
The promoters and enhancers and their accessory proteins allow tight regulation of...
16.8K
Ribosomal RNA Synthesis
13.5K
Ribosome synthesis is a highly complex and coordinated process involving more than 200 assembly factors. The synthesis and processing of ribosomal components occurs not only in the nucleolus but also in the nucleoplasm and the cytoplasm of eukaryotic cells.
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
Ribosome biogenesis begins with the synthesis of 5S and 45S pre-rRNAs by distinct RNA polymerases. The primary transcripts are extensively processed and modified before they are bound and folded by ribosomal proteins and assembly factors,...
13.5K
RNA Polymerase II Accessory Proteins
9.5K
Proteins that regulate transcription can do so either via direct contact with RNA Polymerase or through indirect interactions facilitated by adaptors, mediators, histone-modifying proteins, and nucleosome remodelers. Direct interactions to activate transcription is seen in bacteria as well as in some eukaryotic genes. In these cases, upstream activation sequences are adjacent to the promoters, and the activator proteins interact directly with the transcriptional machinery. For example, in...
9.5K
Eukaryotic RNA Polymerases
24.7K
RNA Polymerase (RNAP) is conserved in all animals, with bacterial, archaeal, and eukaryotic RNAPs sharing significant sequence, structural, and functional similarities. Among the three eukaryotic RNAPs, RNA Polymerase II is most similar to bacterial RNAP in terms of both structural organization and folding topologies of the enzyme subunits. However, these similarities are not reflected in their mechanism of action.
All three eukaryotic RNAPs require specific transcription factors, of which the...
All three eukaryotic RNAPs require specific transcription factors, of which the...
24.7K
Bacterial Transcription
29.6K
RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
29.6K


