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相关概念视频

Transcription Attenuation in Prokaryotes02:42

Transcription Attenuation in Prokaryotes

16.1K
Transcriptional attenuation occurs when RNA transcription is prematurely terminated due to the formation of a terminator mRNA hairpin structure.  Bacteria use these hairpins to regulate the transcription process and control the synthesis of several amino acids including histidine, lysine, threonine, and phenylalanine. Transcription attenuation takes place in the non-coding regions of mRNA.
There are several different mechanisms used to attenuate transcription. In ribosome mediated...
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Bacterial RNA Polymerase00:43

Bacterial RNA Polymerase

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Bacterial Transcription01:53

Bacterial Transcription

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RNA polymerase (RNAP) carries out DNA-dependent RNA synthesis in both bacteria and eukaryotes. Bacteria do not have a membrane-bound nucleus. So, transcription and translation occur simultaneously, on the same DNA template.
Transcription can be divided into three main stages, each involving distinct DNA sequences to guide the polymerase. These are:
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Transcription in Prokaryotes01:28

Transcription in Prokaryotes

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Transcription is a highly regulated process that converts genetic information into RNA molecules. The transcription cycle is divided into three key stages: initiation, elongation, and termination, each driven by specific molecular mechanisms.Initiation of TranscriptionIn bacteria, transcription begins when the RNA polymerase core enzyme associates with a sigma factor to form a holoenzyme. For example, the E. coli sigma factor called σ70 forms a holoenzyme, which recognizes the -10 (Pribnow...
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Ribosome Profiling02:24

Ribosome Profiling

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Ribosome profiling or ribo-sequencing is a deep sequencing technique that produces a snapshot of active translation in a cell. It selectively sequences the mRNAs protected by ribosomes to get an insight into a cell’s translation landscape at any given point in time.
Applications of ribosome profiling
Ribosome profiling has many applications, including in vivo monitoring of translation inside a particular organ or tissue type and quantifying new protein synthesis levels.
The technique...
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A Fast and Reliable Pipeline for Bacterial Transcriptome Analysis Case study: Serine-dependent Gene Regulation in Streptococcus pneumoniae
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低生物质的细菌转录学正在成形.

Qinnan Yang1, Eric C Martens1

  • 1Department of Microbiology and Immunology, University of Michigan Medical School, Ann Arbor, MI 48109-5620, USA.

Trends in microbiology
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概括
此摘要是机器生成的。

研究人员使用低输入细菌RNA测序 (RNA-seq) 方法对不同大小的Bacteroides thetaiotaomicron的基因表达进行了分析. 这种技术使得研究通过光激活细胞分类 (FACS) 排序的单个细菌细胞的转录变异成为可能.

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科学领域:

  • 微生物学 微生物学
  • 基因组学就是基因组学.
  • 分子生物学分子生物学

背景情况:

  • 细菌的基因表达在基因相同的种群中可能有所不同.
  • 了解这些变异对于研究微生物生理学和适应性至关重要.
  • 以前的方法缺乏对小细胞种群进行分析的灵敏度.

研究的目的:

  • 开发和应用一种低输入的细菌RNA测序 (RNA-seq) 管道.
  • 为了转录地描述不同的细胞大小群体的*Bacteroides thetaiotaomicron*.
  • 为了能够在排序的细菌细胞中分析转录异质性.

主要方法:

  • 使用了低输入的细菌RNA测序 (RNA-seq) 管道.
  • 采用光激活细胞分类 (FACS) 来分离小,中,大细胞群.
  • 分析了被排序的 *Bacteroides thetaiotaomicron* 细胞的转录组.

主要成果:

  • 成功地描述了小,中,大细胞群体的转录组.
  • 证明了测量FACS排序细菌细胞中的转录差异的可行性.
  • 鉴定了与细胞大小或其他FACS可排序特征相关的潜在转录变异.

结论:

  • 开发的低输入RNA-seq管道对细菌转录组的概况有效.
  • 这种方法有助于研究微生物种群中的转录异质性.
  • 根据形态或其他特征,为研究细菌细胞间变异性开辟了新的途径.