分析豆虫中翅膀基因网络组件的重复和可能的子功能化
Omid Saleh Ziabari1,2, Kevin D Deem1, Qingyi Zhong1
1Department of Biology, University of Rochester, Rochester, NY, 14627.
bioRxiv : the preprint server for biology
|July 14, 2025
概括
翼基因调节网络 (wGRN) 中的基因重复和亚功能化可能解释了 pea aphids 翅膀二态的进化. 这项研究研究了在有翅膀和无翅膀的形态中wGRN基因表达和重复.
科学领域:
- 进化发育生物学 进化发育生物学
- 遗传学 遗传学 是一个
- 分子生物学分子生物学
背景情况:
- 了解进化新性的遗传基础,例如特征的获得和丧失,是进化发育生物学的一个关键目标.
- 基因调节网络 (GRNs) 协调发育,并且经常与新表型的演化有关.
- 翅膀基因调节网络 (wGRN) 在 * Drosophila melanogaster * 中得到了充分研究,为研究发育进化提供了一个模型.
研究的目的:
- 为了研究wGRN在豆,Acyrthosiphon pisum*翅膀二重形态的进化中的作用.
- 测试假设,通过表达变化或基因重复接着亚功能化,对wGRN组件的修改是翅膀二态化的基础.
主要方法:
- 在豆虫基因组中的wGRN基因的注释.
- 评估wGRN基因表达在不同雌性体内和形态 (有翅膀/没有翅膀,男性/无性雌性) 的评估.
- 在wGRN中识别和分析基因复制事件.
主要成果:
- 在32个评估的wGRN基因中,只有2个表现出形态偏差表达.
- 三个翅膀基因 (*apterous*, *warts*, *decapentaplegic*) 经历了重复,并列基因表现出不同的表达模式 (性别,形态或特定阶段).
- 特定的复制品 (*wts2*, *dpp3*) 显示出可能与无翼男性发育相关的表达模式.
结论:
- 基因重复和随后的子功能化是推动豆虫翅膀二形态演化的潜在机制,允许通过绕过类限制来适应.
- 这些发现有助于了解发育基因网络如何演变以产生新型表型.
相关概念视频
Gene Duplication and Divergence
6.3K
The seminal work of Ohno in 1970 popularized the idea of gene duplication and divergence. DNA sequence comparison studies reveal that a large portion of the genes in bacteria, archaebacteria, and eukaryotes was generated by gene duplication and divergence, indicating its critical role in evolution.
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
The duplicated copies of the gene are called Paralogs. Paralogs with similar sequences and functions form a gene family. Across several species, a large number of gene families are...
6.3K
Epistasis Analysis
5.2K
Although Mendel chose seven unrelated traits in peas to study gene segregation, most traits involve multiple gene interactions that create a spectrum of phenotypes. When the interaction of various genes or alleles at different locations influences a phenotype, this is called epistasis. Epistasis often involves one gene masking or interfering with the expression of another (antagonistic epistasis). Epistasis often occurs when different genes are part of the same biochemical pathway. The...
5.2K
Cis-regulatory Sequences
10.1K
Cis-regulatory sequences are short fragments of non-coding DNA that are present on the same chromosomes as the genes that they regulate. These fragments serve as binding sites for transcriptional regulators, proteins that are responsible for controlling gene transcription and differential gene expression across cell types in eukaryotes. Cis-regulatory sequences can be close to the gene of interest or thousands of bases away in the DNA sequence; however, those sequences that are further away are...
10.1K
Gene Families
9.2K
Gene families consist of groups of genes proposed to have originated from a common ancestor. Typically these arise through events in which a gene or genes are mistakenly duplicated during cell division. Unlike their parent genes (which are subject to selection pressure to maintain function), these gene copies do not need to preserve their sequences and may evolve at a relatively faster rate.
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
Occasionally these regions can be adapted to take on new roles within the organism, becoming novel genes...
9.2K
Polytene Chromosomes
10.3K
Polytene chromosomes are giant interphase chromosomes with several DNA strands placed side by side. They were discovered in the year 1881 by Balbiani in salivary glands, intestine, muscles, malpighian tubules, and hypoderm of larvae Chironomus plumosus. Hence, these are also called "Salivary gland chromosomes." These are found in insects of the order Diptera and Collembola; in certain organs of mammals; and synergids, antipodes of flowering plants. Polytene chromosomes are also...
10.3K


