斯里兰卡登革热病毒血清型-2菌株的分子流行病学和进化特征
Dinuka Ariyaratne1,2, Tibutius Thanesh1,2,3,4,5, Pramanayagam Jayadas1
1Institute of Allergology and Immunology, University of Sri Jayewardenepura, Sri Lanka.
medRxiv : the preprint server for health sciences
|July 15, 2025
概括
2016-2023年斯里兰卡的2型登革热病毒 (DENV-2) 菌株属于II.F.1基因型,与区域菌株有密切联系. 鉴定到的突变可能会影响病毒复制和免疫逃避,强调需要加强DENV监测.
科学领域:
- 病毒学 病毒学
- 流行病学 流行病学
- 遗传学 是一个遗传学.
背景情况:
- 登革热病毒 (DENV) 监测对于疫情控制和疫苗实施至关重要.
- 鉴定DENV血清型和血统的特征有助于理解传播动态.
研究的目的:
- 从2016年到2023年在斯里兰卡传播的DENV-2菌株的特征.
- 分析斯里兰卡DENV-2的进化动态,地理分布和突变.
主要方法:
- 使用牛津纳米孔技术对92个DENV-2样本进行测序.
- 使用IQ-TREE构建一个家族遗传树的家族遗传分析.
- 在封面 (E) 和NS1区域中分析非同义氨基酸变化.
主要成果:
- 2016-2023年的斯里兰卡DENV-2序列属于基因型II.F.1系.
- 这些菌株与当代的南亚和东南亚菌株密切相关.
- 在E区域确定了15个非同名突变,在NS1区域确定了22个,其中一些与增加病毒复制和免疫逃避有关.
结论:
- 加强DENV监测对于监测进化模式至关重要.
- 根据进化见解,可以采取及时和适当的控制措施.
- 了解病毒突变有助于预测和管理登革热疫情.
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