类动物特有的保存非编码元素的进化表明它们在二次水生适应过程中肢体变化中的作用
Zhenhua Zhang1, Zhenpeng Yu1, Yujie Chong1
1Jiangsu Key Laboratory for the Conservation and Utilization of Biodiversity in the Middle and Lower Reaches of the Yangtze River, College of Life Sciences, Nanjing Normal University, Nanjing, 210023, China.
BMC biology
|July 16, 2025
概括
保存的非编码元素 (CNEs) 显示鱼的序列分歧,影响四肢发育. 这些遗传变化,而不是单一的CNE,推动了水生哺乳动物复杂的四肢形态进化.
科学领域:
- 进化生物学是进化的生物学.
- 基因组学就是基因组学.
- 发育生物学是发展生物学.
背景情况:
- 肢体形态对于动物适应各种环境至关重要.
- 鱼表现出显著的四肢修饰,如状前肢和后肢回归,作为关键的二次水生适应.
- 了解鱼肢体进化的分子基础是研究的一个关键领域.
研究的目的:
- 研究保存的非编码元素 (CNEs) 在鱼肢体进化中的作用.
- 识别鱼在水生适应过程中肢体形态变化的基础分子机制.
主要方法:
- 比较基因组学以确定与肢体发育相关的CNE中的谱系特异序列分歧.
- 构建一个转基因小鼠模型来测试一种类动物特异性增强剂的功能 (hs1586).
- 转录基因和表观基因分析,以评估转基因小鼠中的表型效应.
主要成果:
- 类CNEs表现出序列分歧 (突变和indels),可能改变转录因子的结合和调节活性.
- 一种类动物特异性增强剂 (hs1586) 在胚胎日10.5.5时诱导了转基因小鼠前肢的表型差异.
- 增强剂在小鼠中的冗余补偿了hs1586后胚胎11.5日的影响,这表明复杂的遗传调节.
结论:
- 在CNE的序列分歧在鱼肢体进化中起着功能性作用.
- 鱼中复杂的四肢形态变化可能涉及多个CNE和/或基因,而不是单个元素.
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