相关实验视频
Updated: Sep 13, 2025

14:57
Yeast As a Chassis for Developing Functional Assays to Study Human P53
Published on: August 4, 2019
9.6K
希尔型方程揭示了由p53脉冲驱动的目标蛋白表达的调节原理
1Department of Mathematics and International Center for Quantum and Molecular Structures Shanghai University Shanghai China.
FASEB bioAdvances
|August 1, 2025
概括
这项研究表明,单个希尔式方程可以从转录因子 (TF) 脉冲下的mRNA水平中预测平均稳定状态蛋白质水平. 这一发现允许从转录组预测蛋白质组和微调基因表达.
科学领域:
- 分子生物学分子生物学
- 系统生物学 系统生物学
- 遗传学 遗传学 是一个
背景情况:
- 基因表达步骤之间的定量关系,从转录因子结合到蛋白质合成,是争论的.
- 在稳定状态下,蛋白质水平通常被认为主要由mRNA水平决定.
研究的目的:
- 调查一个单一的定量模型是否可以描述mRNA和蛋白质表达动态.
- 利用基因表达数据建立一种从转录组中预测蛋白质组的方法.
主要方法:
- 在转录因子 (TF) 脉冲下利用先前建立的Hill型方程来表达mRNA.
- 应用同样的方程来建模平均稳定状态蛋白质表达.
- 使用p53点基因BAX.验证了模型.
主要成果:
- 希尔式方程准确地描述了TF脉冲下的平均稳定状态蛋白质表达.
- 发现mRNA和蛋白质表达的平均折叠变化在稳定状态下是相当的.
- 该模型预测BAX的mRNA和蛋白质表达的折叠变化为1.35,与观察到的值 (mRNA为1.40,蛋白质为1.28) 非常接近.
结论:
- 一种统一的定量方法可以将转录组与稳定状态中的蛋白质组联系起来.
- 希尔式方程为微调基因表达和从mRNA中预测蛋白质水平提供了一个工具.
- 引入了评估蛋白质积累和稳定性的定量指标.
相关概念视频
Abnormal Proliferation
4.6K
Under normal conditions, most adult cells remain in a non-proliferative state unless stimulated by internal or external factors to replace lost cells. Abnormal cell proliferation is a condition in which the cell's growth exceeds and is uncoordinated with normal cells. In such situations, cell division persists in the same excessive manner even after cessation of the stimuli, leading to persistent tumors. The tumor arises from the damaged cells that replicate to pass the damage to the...
4.6K
Negative Regulator Molecules
36.0K
Positive regulators allow a cell to advance through cell cycle checkpoints. Negative regulators have an equally important role as they terminate a cell’s progression through the cell cycle—or pause it—until the cell meets specific criteria.
36.0K
Regulation of Expression at Multiple Steps
1.0K
The gene expression in cells is regulated at different stages: (i) transcription, (ii) RNA processing, (iii) RNA localization, and (iv) translation. Transcriptional regulation is mediated by regulatory proteins such as transcription factors, activators, or repressors—these control gene expression by initiating or inhibiting the transcription of genes. Once a precursor or pre-mRNA is produced, it undergoes post-transcriptional modification, including 5' capping, splicing, and the...
1.0K
Interactions Between Signaling Pathways
6.5K
Signaling cascades usually lack linearity. Multiple pathways interact and regulate one another, allowing cells to integrate and respond to diverse environmental stimuli.
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
Convergence and divergence, and cross-talk between signaling pathways
Two distinct signaling pathways can converge on a single functional unit, which may either be a single protein or a complex of proteins. The response is either functionally distinct or synergistic between the two pathways but different from the response...
6.5K
PI3K/mTOR/AKT Signaling Pathway
4.0K
The mammalian target of rapamycin (mTOR) is a serine/threonine kinase that regulates growth, proliferation, and cell survival in response to hormones, growth factors, or nutrient availability. This kinase exists in two structurally and functionally distinct forms: mTOR complex 1 (mTORC1) and mTOR complex 2 (mTORC2). The first form (mTORC1) is composed of a rapamycin-sensitive Raptor and proline-rich Akt substrate, PRAS40. In contrast, mTORC2 consists of a...
4.0K
Regulation of Expression Occurs at Multiple Steps
23.4K
Gene expression can be regulated at almost every step from gene to protein. Transcription is the step that is most commonly regulated. This involves the binding of proteins to short regulatory sequences on the DNA. This association can either promote or inhibit the transcription of a gene associated with the respective sequence.
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
Transcription results in the generation of precursor (pre-mRNA) that consists of both exons and introns, which needs further processing before being translated to a...
23.4K

