5'UTR和N-终端编码序列的组合调整,以增强Corynebacterium glutamicum中的复合蛋白表达
Xiuxia Liu1,2,3, Guangying Li1,2,3, Sinan Cui1,2,3
1School of Biotechnology and Key Laboratory of Industrial Biotechnology of Ministry of Education, Jiangnan University, Wuxi 214122, China.
ACS synthetic biology
|August 1, 2025
概括
研究人员确定了关键的5'未翻译区域 (UTR) 和N端编码序列 (NCS) 特征,这些特征精确地控制了Corynebacterium glutamicum中的蛋白质生产率. 这为优化微生物细胞工厂提供了一个强大的新工具.
科学领域:
- 合成生物学 合成生物学
- 代谢工程是代谢工程.
- 分子生物学分子生物学
背景情况:
- 在Corynebacterium glutamicum中的基因表达调节对于微生物细胞工厂至关重要.
- 5' 未翻译区域 (UTR) 和 N-终端编码序列 (NCS) 是已知的监管元素.
- 关于5'UTR/NCS序列与C. glutamicum中蛋白质表达率之间的定量关系的研究有限.
研究的目的:
- 建立和验证一个预测模型,将5'UTR和NCS序列特征与C. glutamicum中的蛋白质表达水平联系起来.
- 为了确定影响蛋白质生产的特定序列特征.
- 开发一种用于微调C. glutamicum中的基因表达和蛋白质生产的工具.
主要方法:
- 构建一个全面的5'UTR和NCS库.
- 使用光激活细胞分类 (FACS) 和高通量测序来选表达水平.
- 应用了深度学习模型,并分析了序列特征 (CG内容,MFE,tRNA适应性),以建立序列表达关系.
主要成果:
- 实现了增强绿色光蛋白 (eGFP) 表达的5级规范范围.
- 确定了四个最佳的5'UTR和四个最佳的NCS序列,对各种外源蛋白具有广泛的兼容性.
- 证明了5'UTR和NCS组合的协同作用,使EGFP表达的动态调节从45%到511%实现,并影响其他蛋白质,如mCherry和抗体重链.
结论:
- 在C. glutamicum中,已经建立了5'UTR/NCS序列特征和蛋白质表达率之间的明确模式.
- 鉴定的特征序列及其组合为精确控制蛋白质生产提供了多功能工具.
- 这项工作显著提高了设计C. glutamicum以优化重组蛋白质合成的能力.
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