对线探针测定和针对药物耐药结核病诊断的下一代测序进行比较评估
Giovanna Carpi1, Marva Seifert2, Andres De la Rossa1
1FIND, Geneva, Switzerland.
EBioMedicine
|August 5, 2025
概括
针对性下一代测序 (tNGS) 与线索探测 (LPA) 相比,在检测耐药结核病 (DR-TB) 方面具有更高的灵敏度. 这些发现支持将tNGS集成到DR-TB诊断算法中.
科学领域:
- 分子诊断学 分子诊断学
- 结核病研究 结核病研究
- 基因组测序是指基因组的测序.
背景情况:
- 准确检测耐药结核病 (DR-TB) 对于有效治疗和传播控制至关重要.
- 对诊断试验的比较评估对于高负担环境中的临床决策至关重要.
研究的目的:
- 将目标下一代测序 (tNGS) 工作流程的诊断性能与用于DR-TB检测的线索探测 (LPA) 进行比较.
- 评估关键抗结核药物的敏感性和特异性,包括利芬素,异亚,诺基诺和阿米卡.
主要方法:
- 在Seq&Treat研究中,评估了两个tNGS工作流程 (GenoScreen Deeplex Myc-TB和牛津纳米孔技术) 和 Hain LPA (MTBDRplus和MTBDRsl).
- 对DR-TB有风险的个体的直接沉积物样本进行了性能评估.
- 使用了表型药物敏感性测试和全基因组测序的复合参考标准.
主要成果:
- 两种tNGS工作流都显示了与LPA (91.9-92.3%) 相比,对利芬素和异化的敏感性显著更高 (≥95%).
- GenoScreen显示了对诺基诺和阿米卡辛耐药性检测的最高灵敏度.
- 对于LPAs和ONT,完全试验失败率较低,对于GenoScreen则中度较高.
结论:
- 与DR-TB的LPA相比,tNGS工作流提供了更高的灵敏度和更广泛的抗药性检测.
- 这些发现提供了指导DR-TB诊断算法优化的证据.
- 整合tNGS可以增强DR-TB管理策略.
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