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深度学习揭示了古代蛋白质组中的抗生素
Marcelo D T Torres1,2,3,4, Fangping Wan1,2,3,4, Cesar de la Fuente-Nunez5,6,7,8
1Machine Biology Group, Departments of Psychiatry and Microbiology, Institute for Biomedical Informatics, Institute for Translational Medicine and Therapeutics, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA, USA.
Nature microbiology
|August 12, 2025
概括
科学家们发现了新型抗生素称为archaeasins从archaea,一个以前未开发的来源. 这些化合物对抗耐药细菌具有高的抗微生物活性,其中一种候选物在动物模型中被证明有效.
科学领域:
- 微生物学 微生物学
- 生物技术是生物技术.
- 计算生物学 计算生物学
背景情况:
- 抗菌素耐药性 (AMR) 是一个重大的全球健康威胁,需要发现新的抗生素.
- 古代生物代表着一个尚未探索的生命领域,有可能识别新的抗微生物化合物.
研究的目的:
- 通过深度学习探索新型抗生素候选者的古体.
- 识别和表征来自古生物的抗微生物.
主要方法:
- 深度学习模型被用来挖掘233个古老的蛋白质组.
- 确定了12623种潜在的抗微生物分子 (古菌素).
- 合成了80种考古素,并在体外和体内进行了试验.
主要成果:
- 93%的合成的考古素在体外表现出对关键的格拉姆阴性和格拉姆阳性病原体的活性.
- 在小鼠模型中,Archaeasin-73在减少细菌负载方面表现出显著的体内疗效.
- 考古素具有独特的组成特征,与已知的抗微生物不同.
结论:
- 古生物是发现下一代抗生素的一个有希望的来源.
- 深度学习是一种有效的工具,用于探索微生物暗物质的新疗法.
- 考古素代表了一类新的抗微生物化合物,具有临床开发潜力.
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